Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.96□□□□□ -0.49
CiitaP79621 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
CiitaP79621 Gfra2-203ENSMUST00000227697 1323 ntBASIC11.96□□□□□ -0.49
CiitaP79621 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CiitaP79621 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.96□□□□□ -0.49
CiitaP79621 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
CiitaP79621 Gm14213-201ENSMUST00000119778 768 ntBASIC11.96□□□□□ -0.49
CiitaP79621 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC11.96□□□□□ -0.49
CiitaP79621 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
CiitaP79621 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CiitaP79621 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
CiitaP79621 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
CiitaP79621 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CiitaP79621 Gm34379-201ENSMUST00000195036 290 ntBASIC11.96□□□□□ -0.49
CiitaP79621 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC11.96□□□□□ -0.49
CiitaP79621 Gm40414-201ENSMUST00000197608 481 ntBASIC11.96□□□□□ -0.49
CiitaP79621 Gm43249-201ENSMUST00000200464 458 ntBASIC11.96□□□□□ -0.49
CiitaP79621 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.96□□□□□ -0.49
CiitaP79621 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
CiitaP79621 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC11.96□□□□□ -0.49
CiitaP79621 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CiitaP79621 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CiitaP79621 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CiitaP79621 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CiitaP79621 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CiitaP79621 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.96□□□□□ -0.5
CiitaP79621 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
CiitaP79621 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
CiitaP79621 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CiitaP79621 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
CiitaP79621 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.96□□□□□ -0.5
CiitaP79621 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CiitaP79621 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CiitaP79621 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CiitaP79621 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
CiitaP79621 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.96□□□□□ -0.5
CiitaP79621 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CiitaP79621 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CiitaP79621 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CiitaP79621 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CiitaP79621 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
CiitaP79621 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CiitaP79621 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CiitaP79621 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CiitaP79621 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.95□□□□□ -0.5
CiitaP79621 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CiitaP79621 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
CiitaP79621 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CiitaP79621 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CiitaP79621 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CiitaP79621 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CiitaP79621 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
CiitaP79621 Gm11340-201ENSMUST00000119226 412 ntBASIC11.95□□□□□ -0.5
CiitaP79621 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
CiitaP79621 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CiitaP79621 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC11.95□□□□□ -0.5
CiitaP79621 Gm17221-201ENSMUST00000163909 481 ntBASIC11.95□□□□□ -0.5
CiitaP79621 Gm17073-201ENSMUST00000168069 556 ntBASIC11.95□□□□□ -0.5
CiitaP79621 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC11.95□□□□□ -0.5
CiitaP79621 Gm4903-201ENSMUST00000210462 405 ntBASIC11.95□□□□□ -0.5
CiitaP79621 Gm8162-201ENSMUST00000213951 665 ntBASIC11.95□□□□□ -0.5
CiitaP79621 Gm18042-201ENSMUST00000219887 790 ntBASIC11.95□□□□□ -0.5
CiitaP79621 AC134601.2-201ENSMUST00000221071 130 ntBASIC11.95□□□□□ -0.5
CiitaP79621 CT573086.4-201ENSMUST00000226729 342 ntBASIC11.95□□□□□ -0.5
CiitaP79621 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
CiitaP79621 Mir483-201ENSMUST00000093631 73 ntBASIC11.95□□□□□ -0.5
CiitaP79621 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CiitaP79621 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CiitaP79621 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CiitaP79621 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CiitaP79621 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CiitaP79621 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CiitaP79621 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.95□□□□□ -0.5
CiitaP79621 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CiitaP79621 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CiitaP79621 Gm37264-201ENSMUST00000194916 2192 ntBASIC11.95□□□□□ -0.5
CiitaP79621 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
CiitaP79621 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CiitaP79621 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CiitaP79621 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CiitaP79621 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CiitaP79621 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CiitaP79621 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CiitaP79621 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CiitaP79621 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CiitaP79621 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.94□□□□□ -0.5
CiitaP79621 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.94□□□□□ -0.5
CiitaP79621 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CiitaP79621 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.94□□□□□ -0.5
CiitaP79621 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CiitaP79621 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CiitaP79621 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CiitaP79621 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CiitaP79621 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CiitaP79621 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CiitaP79621 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CiitaP79621 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CiitaP79621 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CiitaP79621 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
CiitaP79621 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms