Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
Lmo4P61969 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Lmo4P61969 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC8.92□□□□□ -0.98
Lmo4P61969 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC8.92□□□□□ -0.98
Lmo4P61969 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC8.92□□□□□ -0.98
Lmo4P61969 Gm35850-202ENSMUST00000211705 2120 ntBASIC8.92□□□□□ -0.98
Lmo4P61969 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Lmo4P61969 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Lmo4P61969 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC8.91□□□□□ -0.98
Lmo4P61969 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Lmo4P61969 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Lmo4P61969 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Lmo4P61969 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Lmo4P61969 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Lmo4P61969 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Lmo4P61969 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC8.91□□□□□ -0.98
Lmo4P61969 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Lmo4P61969 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Gm15625-201ENSMUST00000117617 1093 ntBASIC8.91□□□□□ -0.98
Lmo4P61969 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC8.91□□□□□ -0.98
Lmo4P61969 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC8.91□□□□□ -0.98
Lmo4P61969 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC8.91□□□□□ -0.98
Lmo4P61969 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC8.91□□□□□ -0.98
Lmo4P61969 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC8.91□□□□□ -0.98
Lmo4P61969 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Lmo4P61969 Gm43097-201ENSMUST00000196867 151 ntBASIC8.91□□□□□ -0.98
Lmo4P61969 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
Lmo4P61969 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC8.91□□□□□ -0.98
Lmo4P61969 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC8.91□□□□□ -0.98
Lmo4P61969 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
Lmo4P61969 Gm38192-201ENSMUST00000194364 1847 ntBASIC8.91□□□□□ -0.98
Lmo4P61969 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC8.91□□□□□ -0.98
Lmo4P61969 AC153524.2-202ENSMUST00000220401 1794 ntBASIC8.91□□□□□ -0.98
Lmo4P61969 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Lmo4P61969 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC8.91□□□□□ -0.98
Lmo4P61969 Gm45206-201ENSMUST00000206885 2285 ntBASIC8.91□□□□□ -0.98
Lmo4P61969 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Lmo4P61969 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Lmo4P61969 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC8.9□□□□□ -0.98
Lmo4P61969 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Lmo4P61969 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Lmo4P61969 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Lmo4P61969 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Lmo4P61969 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC8.9□□□□□ -0.98
Lmo4P61969 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Lmo4P61969 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Lmo4P61969 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC8.9□□□□□ -0.98
Lmo4P61969 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Lmo4P61969 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Lmo4P61969 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Lmo4P61969 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Lmo4P61969 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC8.9□□□□□ -0.98
Lmo4P61969 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Lmo4P61969 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Lmo4P61969 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Lmo4P61969 Bcl2-202ENSMUST00000189999 2841 ntBASIC8.9□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms