Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubgcp3P58854 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Tubgcp3P58854 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Tubgcp3P58854 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Tubgcp3P58854 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tubgcp3P58854 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tubgcp3P58854 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tubgcp3P58854 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Tubgcp3P58854 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tubgcp3P58854 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Tubgcp3P58854 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Tubgcp3P58854 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tubgcp3P58854 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tubgcp3P58854 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Tubgcp3P58854 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.27□□□□□ -0.61
Tubgcp3P58854 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tubgcp3P58854 Mir6979-201ENSMUST00000183927 56 ntBASIC11.27□□□□□ -0.61
Tubgcp3P58854 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tubgcp3P58854 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tubgcp3P58854 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Tubgcp3P58854 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.27□□□□□ -0.61
Tubgcp3P58854 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Tubgcp3P58854 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tubgcp3P58854 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tubgcp3P58854 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tubgcp3P58854 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tubgcp3P58854 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tubgcp3P58854 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC11.27□□□□□ -0.61
Tubgcp3P58854 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tubgcp3P58854 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Tubgcp3P58854 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Tubgcp3P58854 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.27□□□□□ -0.61
Tubgcp3P58854 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Tubgcp3P58854 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Tubgcp3P58854 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tubgcp3P58854 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tubgcp3P58854 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC11.27□□□□□ -0.61
Tubgcp3P58854 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tubgcp3P58854 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Tubgcp3P58854 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.26□□□□□ -0.61
Tubgcp3P58854 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.26□□□□□ -0.61
Tubgcp3P58854 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tubgcp3P58854 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Gm14592-201ENSMUST00000117201 560 ntBASIC11.26□□□□□ -0.61
Tubgcp3P58854 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.26□□□□□ -0.61
Tubgcp3P58854 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.26□□□□□ -0.61
Tubgcp3P58854 Gm14585-201ENSMUST00000120713 634 ntBASIC11.26□□□□□ -0.61
Tubgcp3P58854 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Gm15881-201ENSMUST00000148792 942 ntBASIC11.26□□□□□ -0.61
Tubgcp3P58854 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Tubgcp3P58854 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Gm3551-201ENSMUST00000190750 664 ntBASIC11.26□□□□□ -0.61
Tubgcp3P58854 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.26□□□□□ -0.61
Tubgcp3P58854 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.26□□□□□ -0.61
Tubgcp3P58854 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.26□□□□□ -0.61
Tubgcp3P58854 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.26□□□□□ -0.61
Tubgcp3P58854 Gm10020-201ENSMUST00000081993 612 ntBASIC11.26□□□□□ -0.61
Tubgcp3P58854 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.26□□□□□ -0.61
Tubgcp3P58854 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Tubgcp3P58854 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tubgcp3P58854 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms