Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.77□□□□□ -0.52
NrlP54846 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
NrlP54846 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
NrlP54846 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
NrlP54846 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
NrlP54846 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NrlP54846 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
NrlP54846 Gm11475-201ENSMUST00000118482 476 ntBASIC11.77□□□□□ -0.53
NrlP54846 Gm15136-201ENSMUST00000120552 533 ntBASIC11.77□□□□□ -0.53
NrlP54846 Gm14052-201ENSMUST00000121434 1031 ntBASIC11.77□□□□□ -0.53
NrlP54846 Gm25604-201ENSMUST00000158359 133 ntBASIC11.77□□□□□ -0.53
NrlP54846 Gm16165-201ENSMUST00000160140 795 ntBASIC11.77□□□□□ -0.53
NrlP54846 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
NrlP54846 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC11.77□□□□□ -0.53
NrlP54846 Snord55-201ENSMUST00000174939 79 ntBASIC11.77□□□□□ -0.53
NrlP54846 Gm43547-201ENSMUST00000197729 328 ntBASIC11.77□□□□□ -0.53
NrlP54846 Gm43610-201ENSMUST00000199117 365 ntBASIC11.77□□□□□ -0.53
NrlP54846 Gm43506-201ENSMUST00000200675 753 ntBASIC11.77□□□□□ -0.53
NrlP54846 Gm42867-201ENSMUST00000202995 469 ntBASIC11.77□□□□□ -0.53
NrlP54846 Gm44953-201ENSMUST00000208745 1286 ntBASIC11.77□□□□□ -0.53
NrlP54846 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC11.77□□□□□ -0.53
NrlP54846 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
NrlP54846 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC11.77□□□□□ -0.53
NrlP54846 AC137871.1-201ENSMUST00000228278 475 ntBASIC11.77□□□□□ -0.53
NrlP54846 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
NrlP54846 Gm5449-201ENSMUST00000081132 357 ntBASIC11.77□□□□□ -0.53
NrlP54846 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.77□□□□□ -0.53
NrlP54846 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NrlP54846 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NrlP54846 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.77□□□□□ -0.53
NrlP54846 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
NrlP54846 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NrlP54846 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NrlP54846 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NrlP54846 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NrlP54846 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.77□□□□□ -0.53
NrlP54846 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NrlP54846 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
NrlP54846 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
NrlP54846 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NrlP54846 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
NrlP54846 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NrlP54846 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NrlP54846 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.77□□□□□ -0.53
NrlP54846 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NrlP54846 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
NrlP54846 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
NrlP54846 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NrlP54846 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NrlP54846 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NrlP54846 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NrlP54846 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
NrlP54846 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
NrlP54846 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NrlP54846 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NrlP54846 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NrlP54846 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NrlP54846 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
NrlP54846 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
NrlP54846 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
NrlP54846 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC11.76□□□□□ -0.53
NrlP54846 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
NrlP54846 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.76□□□□□ -0.53
NrlP54846 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.76□□□□□ -0.53
NrlP54846 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NrlP54846 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC11.76□□□□□ -0.53
NrlP54846 Gm7939-201ENSMUST00000201233 1050 ntBASIC11.76□□□□□ -0.53
NrlP54846 BC080696-201ENSMUST00000202858 1218 ntBASIC11.76□□□□□ -0.53
NrlP54846 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC11.76□□□□□ -0.53
NrlP54846 Gm45094-201ENSMUST00000207013 617 ntBASIC11.76□□□□□ -0.53
NrlP54846 CT030652.1-201ENSMUST00000227377 1235 ntBASIC11.76□□□□□ -0.53
NrlP54846 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NrlP54846 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
NrlP54846 Gm8420-201ENSMUST00000097103 598 ntBASIC11.76□□□□□ -0.53
NrlP54846 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NrlP54846 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NrlP54846 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.76□□□□□ -0.53
NrlP54846 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
NrlP54846 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
NrlP54846 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NrlP54846 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
NrlP54846 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NrlP54846 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.76□□□□□ -0.53
NrlP54846 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.76□□□□□ -0.53
NrlP54846 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
NrlP54846 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NrlP54846 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NrlP54846 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NrlP54846 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
NrlP54846 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
NrlP54846 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
NrlP54846 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NrlP54846 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NrlP54846 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
NrlP54846 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NrlP54846 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NrlP54846 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NrlP54846 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NrlP54846 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NrlP54846 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms