Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.66□□□□□ -0.54
Shmt1P50431 Gm12969-201ENSMUST00000120199 1004 ntBASIC11.66□□□□□ -0.54
Shmt1P50431 Gm12136-201ENSMUST00000120460 1209 ntBASIC11.66□□□□□ -0.54
Shmt1P50431 Gm13022-201ENSMUST00000121181 285 ntBASIC11.66□□□□□ -0.54
Shmt1P50431 Gm11980-201ENSMUST00000121445 986 ntBASIC11.66□□□□□ -0.54
Shmt1P50431 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Shmt1P50431 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shmt1P50431 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC11.66□□□□□ -0.54
Shmt1P50431 Mir7035-201ENSMUST00000184713 82 ntBASIC11.66□□□□□ -0.54
Shmt1P50431 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Shmt1P50431 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Shmt1P50431 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
Shmt1P50431 Capsl-202ENSMUST00000226688 739 ntBASIC11.66□□□□□ -0.54
Shmt1P50431 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shmt1P50431 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shmt1P50431 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.66□□□□□ -0.54
Shmt1P50431 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shmt1P50431 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shmt1P50431 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC11.66□□□□□ -0.54
Shmt1P50431 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shmt1P50431 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Shmt1P50431 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shmt1P50431 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC11.65□□□□□ -0.54
Shmt1P50431 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.65□□□□□ -0.54
Shmt1P50431 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shmt1P50431 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Shmt1P50431 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.65□□□□□ -0.54
Shmt1P50431 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Shmt1P50431 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Shmt1P50431 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shmt1P50431 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shmt1P50431 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shmt1P50431 Smok4a-201ENSMUST00000074512 1455 ntBASIC11.65□□□□□ -0.54
Shmt1P50431 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Shmt1P50431 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shmt1P50431 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shmt1P50431 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shmt1P50431 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shmt1P50431 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC11.65□□□□□ -0.54
Shmt1P50431 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Shmt1P50431 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shmt1P50431 Gm13445-201ENSMUST00000121664 307 ntBASIC11.65□□□□□ -0.54
Shmt1P50431 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC11.65□□□□□ -0.54
Shmt1P50431 Gm5210-201ENSMUST00000182150 1010 ntBASIC11.65□□□□□ -0.54
Shmt1P50431 Gm26982-201ENSMUST00000182250 1151 ntBASIC11.65□□□□□ -0.54
Shmt1P50431 Mir8091-201ENSMUST00000183602 139 ntBASIC11.65□□□□□ -0.54
Shmt1P50431 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Shmt1P50431 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC11.65□□□□□ -0.54
Shmt1P50431 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.65□□□□□ -0.54
Shmt1P50431 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shmt1P50431 AC154176.1-201ENSMUST00000225897 220 ntBASIC11.65□□□□□ -0.54
Shmt1P50431 AC154532.1-201ENSMUST00000227860 965 ntBASIC11.65□□□□□ -0.54
Shmt1P50431 Gm4604-201ENSMUST00000025040 390 ntBASIC11.65□□□□□ -0.54
Shmt1P50431 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shmt1P50431 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shmt1P50431 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shmt1P50431 Gm25201-201ENSMUST00000083093 170 ntBASIC11.65□□□□□ -0.54
Shmt1P50431 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shmt1P50431 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shmt1P50431 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shmt1P50431 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shmt1P50431 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Shmt1P50431 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shmt1P50431 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Shmt1P50431 Gm19027-201ENSMUST00000187291 1355 ntBASIC11.65□□□□□ -0.55
Shmt1P50431 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Shmt1P50431 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
Shmt1P50431 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Shmt1P50431 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Shmt1P50431 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Shmt1P50431 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Shmt1P50431 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Shmt1P50431 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Shmt1P50431 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shmt1P50431 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shmt1P50431 Gm43334-201ENSMUST00000197740 1318 ntBASIC11.64□□□□□ -0.55
Shmt1P50431 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.64□□□□□ -0.55
Shmt1P50431 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shmt1P50431 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shmt1P50431 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shmt1P50431 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shmt1P50431 Gm11560-201ENSMUST00000117567 948 ntBASIC11.64□□□□□ -0.55
Shmt1P50431 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Shmt1P50431 Mir1905-201ENSMUST00000122779 82 ntBASIC11.64□□□□□ -0.55
Shmt1P50431 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC11.64□□□□□ -0.55
Shmt1P50431 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC11.64□□□□□ -0.55
Shmt1P50431 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Shmt1P50431 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Shmt1P50431 Gm37444-201ENSMUST00000193605 439 ntBASIC11.64□□□□□ -0.55
Shmt1P50431 Gm44216-201ENSMUST00000203942 157 ntBASIC11.64□□□□□ -0.55
Shmt1P50431 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shmt1P50431 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Shmt1P50431 Gm7959-201ENSMUST00000221823 1078 ntBASIC11.64□□□□□ -0.55
Shmt1P50431 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Shmt1P50431 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Shmt1P50431 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC11.64□□□□□ -0.55
Shmt1P50431 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shmt1P50431 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Shmt1P50431 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Shmt1P50431 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms