Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.29□□□□□ -0.76
Sox2P48432 Saa-ps-201ENSMUST00000211148 320 ntBASIC10.29□□□□□ -0.76
Sox2P48432 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 AC154461.3-201ENSMUST00000224831 573 ntBASIC10.29□□□□□ -0.76
Sox2P48432 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 Gm22042-201ENSMUST00000082989 165 ntBASIC10.29□□□□□ -0.76
Sox2P48432 Gm26110-201ENSMUST00000083971 165 ntBASIC10.29□□□□□ -0.76
Sox2P48432 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Sox2P48432 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Sox2P48432 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sox2P48432 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sox2P48432 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sox2P48432 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.28□□□□□ -0.76
Sox2P48432 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Sox2P48432 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sox2P48432 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sox2P48432 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sox2P48432 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC10.28□□□□□ -0.76
Sox2P48432 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sox2P48432 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Sox2P48432 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.28□□□□□ -0.76
Sox2P48432 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Sox2P48432 Gm14592-201ENSMUST00000117201 560 ntBASIC10.28□□□□□ -0.76
Sox2P48432 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.28□□□□□ -0.76
Sox2P48432 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sox2P48432 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sox2P48432 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Sox2P48432 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.28□□□□□ -0.76
Sox2P48432 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Sox2P48432 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.28□□□□□ -0.76
Sox2P48432 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.28□□□□□ -0.76
Sox2P48432 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.28□□□□□ -0.76
Sox2P48432 Gm33366-201ENSMUST00000195583 3827 ntBASIC10.28□□□□□ -0.76
Sox2P48432 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sox2P48432 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sox2P48432 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sox2P48432 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Sox2P48432 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sox2P48432 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC10.28□□□□□ -0.76
Sox2P48432 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sox2P48432 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sox2P48432 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sox2P48432 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC10.28□□□□□ -0.76
Sox2P48432 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sox2P48432 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sox2P48432 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC10.28□□□□□ -0.76
Sox2P48432 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sox2P48432 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sox2P48432 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sox2P48432 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sox2P48432 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sox2P48432 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Sox2P48432 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Sox2P48432 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Sox2P48432 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Sox2P48432 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Sox2P48432 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Sox2P48432 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Sox2P48432 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC10.27□□□□□ -0.76
Sox2P48432 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Sox2P48432 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Sox2P48432 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC10.27□□□□□ -0.77
Sox2P48432 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sox2P48432 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sox2P48432 Gm45165-201ENSMUST00000207763 1631 ntBASIC10.27□□□□□ -0.77
Sox2P48432 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sox2P48432 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sox2P48432 Gm37264-201ENSMUST00000194916 2192 ntBASIC10.27□□□□□ -0.77
Sox2P48432 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sox2P48432 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC10.27□□□□□ -0.77
Sox2P48432 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sox2P48432 Gm13461-201ENSMUST00000120980 662 ntBASIC10.27□□□□□ -0.77
Sox2P48432 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sox2P48432 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sox2P48432 Gm17376-201ENSMUST00000166016 84 ntBASIC10.27□□□□□ -0.77
Sox2P48432 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.27□□□□□ -0.77
Sox2P48432 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
Sox2P48432 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.27□□□□□ -0.77
Sox2P48432 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sox2P48432 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
Sox2P48432 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.27□□□□□ -0.77
Sox2P48432 Gm43667-201ENSMUST00000198616 1095 ntBASIC10.27□□□□□ -0.77
Sox2P48432 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.27□□□□□ -0.77
Sox2P48432 Gm43822-201ENSMUST00000200285 476 ntBASIC10.27□□□□□ -0.77
Sox2P48432 Gm4482-201ENSMUST00000200876 742 ntBASIC10.27□□□□□ -0.77
Sox2P48432 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sox2P48432 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.27□□□□□ -0.77
Sox2P48432 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms