Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Usp4P35123 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.58□□□□□ -0.56
Usp4P35123 Gm12857-201ENSMUST00000117678 592 ntBASIC11.58□□□□□ -0.56
Usp4P35123 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.58□□□□□ -0.56
Usp4P35123 Gm15881-201ENSMUST00000148792 942 ntBASIC11.58□□□□□ -0.56
Usp4P35123 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Usp4P35123 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.58□□□□□ -0.56
Usp4P35123 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.58□□□□□ -0.56
Usp4P35123 Gm17391-201ENSMUST00000171036 126 ntBASIC11.58□□□□□ -0.56
Usp4P35123 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.58□□□□□ -0.56
Usp4P35123 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.58□□□□□ -0.56
Usp4P35123 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Usp4P35123 Gm27441-201ENSMUST00000185000 105 ntBASIC11.58□□□□□ -0.56
Usp4P35123 Gm10774-201ENSMUST00000188689 204 ntBASIC11.58□□□□□ -0.56
Usp4P35123 Gm5733-201ENSMUST00000190232 939 ntBASIC11.58□□□□□ -0.56
Usp4P35123 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.58□□□□□ -0.56
Usp4P35123 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.58□□□□□ -0.56
Usp4P35123 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Usp4P35123 AC154461.3-201ENSMUST00000224831 573 ntBASIC11.58□□□□□ -0.56
Usp4P35123 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Usp4P35123 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Usp4P35123 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Usp4P35123 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Usp4P35123 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Usp4P35123 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Usp4P35123 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Usp4P35123 Gm45828-201ENSMUST00000206938 1836 ntBASIC11.58□□□□□ -0.56
Usp4P35123 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Usp4P35123 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Usp4P35123 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Usp4P35123 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Usp4P35123 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Usp4P35123 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Usp4P35123 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Usp4P35123 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Usp4P35123 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp4P35123 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp4P35123 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp4P35123 AC154528.2-201ENSMUST00000228432 3023 ntBASIC11.57□□□□□ -0.56
Usp4P35123 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp4P35123 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Usp4P35123 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Usp4P35123 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp4P35123 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Usp4P35123 AC140462.2-201ENSMUST00000225718 2433 ntBASIC11.57□□□□□ -0.56
Usp4P35123 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp4P35123 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.57□□□□□ -0.56
Usp4P35123 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp4P35123 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp4P35123 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Usp4P35123 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp4P35123 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp4P35123 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.57□□□□□ -0.56
Usp4P35123 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Usp4P35123 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Usp4P35123 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Usp4P35123 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Usp4P35123 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Usp4P35123 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Usp4P35123 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Usp4P35123 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Usp4P35123 Snord17-201ENSMUST00000104526 238 ntBASIC11.57□□□□□ -0.56
Usp4P35123 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Usp4P35123 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Usp4P35123 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Usp4P35123 Gm11628-201ENSMUST00000117568 171 ntBASIC11.57□□□□□ -0.56
Usp4P35123 Gm14460-201ENSMUST00000121511 639 ntBASIC11.57□□□□□ -0.56
Usp4P35123 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.57□□□□□ -0.56
Usp4P35123 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Usp4P35123 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Usp4P35123 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp4P35123 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.57□□□□□ -0.56
Usp4P35123 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.57□□□□□ -0.56
Usp4P35123 Gm38151-201ENSMUST00000195085 289 ntBASIC11.57□□□□□ -0.56
Usp4P35123 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.57□□□□□ -0.56
Usp4P35123 Gm9132-201ENSMUST00000210182 832 ntBASIC11.57□□□□□ -0.56
Usp4P35123 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Usp4P35123 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.57□□□□□ -0.56
Usp4P35123 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp4P35123 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp4P35123 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.57□□□□□ -0.56
Usp4P35123 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.57□□□□□ -0.56
Usp4P35123 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp4P35123 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp4P35123 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp4P35123 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Usp4P35123 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Usp4P35123 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp4P35123 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp4P35123 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp4P35123 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC11.57□□□□□ -0.56
Usp4P35123 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Usp4P35123 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Usp4P35123 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Usp4P35123 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Usp4P35123 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usp4P35123 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usp4P35123 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usp4P35123 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Usp4P35123 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms