Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm9487-201ENSMUST00000216600 472 ntBASIC11.39□□□□□ -0.59
Nfkb1P25799 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC11.39□□□□□ -0.59
Nfkb1P25799 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nfkb1P25799 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nfkb1P25799 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nfkb1P25799 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nfkb1P25799 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nfkb1P25799 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nfkb1P25799 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nfkb1P25799 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nfkb1P25799 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.39□□□□□ -0.59
Nfkb1P25799 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Nfkb1P25799 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.39□□□□□ -0.59
Nfkb1P25799 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.39□□□□□ -0.59
Nfkb1P25799 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nfkb1P25799 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nfkb1P25799 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nfkb1P25799 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Nfkb1P25799 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.38□□□□□ -0.59
Nfkb1P25799 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Nfkb1P25799 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Gm11952-201ENSMUST00000121172 821 ntBASIC11.38□□□□□ -0.59
Nfkb1P25799 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC11.38□□□□□ -0.59
Nfkb1P25799 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC11.38□□□□□ -0.59
Nfkb1P25799 Gm16165-201ENSMUST00000160140 795 ntBASIC11.38□□□□□ -0.59
Nfkb1P25799 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Gm7719-201ENSMUST00000182374 975 ntBASIC11.38□□□□□ -0.59
Nfkb1P25799 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC11.38□□□□□ -0.59
Nfkb1P25799 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.38□□□□□ -0.59
Nfkb1P25799 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC11.38□□□□□ -0.59
Nfkb1P25799 Gm44647-201ENSMUST00000207402 428 ntBASIC11.38□□□□□ -0.59
Nfkb1P25799 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Nfkb1P25799 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Nfkb1P25799 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Nfkb1P25799 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.38□□□□□ -0.59
Nfkb1P25799 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Nfkb1P25799 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Nfkb1P25799 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.38□□□□□ -0.59
Nfkb1P25799 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nfkb1P25799 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Nfkb1P25799 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Nfkb1P25799 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nfkb1P25799 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Nfkb1P25799 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Nfkb1P25799 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nfkb1P25799 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nfkb1P25799 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Nfkb1P25799 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.37□□□□□ -0.59
Nfkb1P25799 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC11.37□□□□□ -0.59
Nfkb1P25799 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Nfkb1P25799 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nfkb1P25799 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nfkb1P25799 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nfkb1P25799 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nfkb1P25799 Gm6158-201ENSMUST00000109467 904 ntBASIC11.37□□□□□ -0.59
Nfkb1P25799 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC11.37□□□□□ -0.59
Nfkb1P25799 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC11.37□□□□□ -0.59
Nfkb1P25799 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nfkb1P25799 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Nfkb1P25799 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Nfkb1P25799 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC11.37□□□□□ -0.59
Nfkb1P25799 Gm18035-201ENSMUST00000211962 589 ntBASIC11.37□□□□□ -0.59
Nfkb1P25799 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nfkb1P25799 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms