Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Gm42858-201ENSMUST00000202512 1704 ntBASIC11.52□□□□□ -0.56
Hoxd8P23463 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxd8P23463 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Hoxd8P23463 AC153524.2-202ENSMUST00000220401 1794 ntBASIC11.52□□□□□ -0.57
Hoxd8P23463 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxd8P23463 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.52□□□□□ -0.57
Hoxd8P23463 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Hoxd8P23463 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Hoxd8P23463 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC11.52□□□□□ -0.57
Hoxd8P23463 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Hoxd8P23463 Gng5-ps-201ENSMUST00000120931 205 ntBASIC11.52□□□□□ -0.57
Hoxd8P23463 Gm25288-201ENSMUST00000122800 265 ntBASIC11.52□□□□□ -0.57
Hoxd8P23463 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxd8P23463 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxd8P23463 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxd8P23463 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC11.52□□□□□ -0.57
Hoxd8P23463 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Hoxd8P23463 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Hoxd8P23463 Gm2448-201ENSMUST00000207080 559 ntBASIC11.52□□□□□ -0.57
Hoxd8P23463 Gm8170-201ENSMUST00000218581 945 ntBASIC11.52□□□□□ -0.57
Hoxd8P23463 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC11.52□□□□□ -0.57
Hoxd8P23463 BX649293.1-201ENSMUST00000227437 631 ntBASIC11.52□□□□□ -0.57
Hoxd8P23463 AC158986.2-201ENSMUST00000227487 618 ntBASIC11.52□□□□□ -0.57
Hoxd8P23463 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxd8P23463 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxd8P23463 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxd8P23463 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxd8P23463 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxd8P23463 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxd8P23463 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Hoxd8P23463 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Hoxd8P23463 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxd8P23463 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.51□□□□□ -0.57
Hoxd8P23463 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxd8P23463 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxd8P23463 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxd8P23463 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxd8P23463 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxd8P23463 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxd8P23463 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxd8P23463 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxd8P23463 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxd8P23463 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxd8P23463 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxd8P23463 Gm8659-201ENSMUST00000120024 1084 ntBASIC11.51□□□□□ -0.57
Hoxd8P23463 Gm22764-201ENSMUST00000158370 92 ntBASIC11.51□□□□□ -0.57
Hoxd8P23463 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC11.51□□□□□ -0.57
Hoxd8P23463 Gm11942-201ENSMUST00000180255 345 ntBASIC11.51□□□□□ -0.57
Hoxd8P23463 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.51□□□□□ -0.57
Hoxd8P23463 Gm44640-201ENSMUST00000206894 247 ntBASIC11.51□□□□□ -0.57
Hoxd8P23463 Gm45584-201ENSMUST00000211586 1143 ntTSL 5 BASIC11.51□□□□□ -0.57
Hoxd8P23463 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.51□□□□□ -0.57
Hoxd8P23463 AC174797.2-201ENSMUST00000225835 165 ntBASIC11.51□□□□□ -0.57
Hoxd8P23463 AC169511.1-201ENSMUST00000227639 995 ntBASIC11.51□□□□□ -0.57
Hoxd8P23463 n-R5s71-201ENSMUST00000093668 119 ntBASIC11.51□□□□□ -0.57
Hoxd8P23463 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Hoxd8P23463 Gm6478-201ENSMUST00000099450 742 ntBASIC11.51□□□□□ -0.57
Hoxd8P23463 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxd8P23463 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxd8P23463 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.51□□□□□ -0.57
Hoxd8P23463 Gm37965-201ENSMUST00000195304 1362 ntBASIC11.51□□□□□ -0.57
Hoxd8P23463 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC11.51□□□□□ -0.57
Hoxd8P23463 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxd8P23463 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxd8P23463 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxd8P23463 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxd8P23463 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.51□□□□□ -0.57
Hoxd8P23463 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC11.51□□□□□ -0.57
Hoxd8P23463 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxd8P23463 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.51□□□□□ -0.57
Hoxd8P23463 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxd8P23463 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxd8P23463 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.51□□□□□ -0.57
Hoxd8P23463 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxd8P23463 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Hoxd8P23463 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxd8P23463 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxd8P23463 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxd8P23463 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxd8P23463 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxd8P23463 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxd8P23463 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.5□□□□□ -0.57
Hoxd8P23463 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxd8P23463 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxd8P23463 Gm13624-201ENSMUST00000120263 462 ntBASIC11.5□□□□□ -0.57
Hoxd8P23463 Gm14052-201ENSMUST00000121434 1031 ntBASIC11.5□□□□□ -0.57
Hoxd8P23463 Gm25843-201ENSMUST00000122582 314 ntBASIC11.5□□□□□ -0.57
Hoxd8P23463 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC11.5□□□□□ -0.57
Hoxd8P23463 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC11.5□□□□□ -0.57
Hoxd8P23463 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Hoxd8P23463 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxd8P23463 Gm43097-201ENSMUST00000196867 151 ntBASIC11.5□□□□□ -0.57
Hoxd8P23463 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxd8P23463 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC11.5□□□□□ -0.57
Hoxd8P23463 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxd8P23463 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Hoxd8P23463 Gm9791-201ENSMUST00000060997 447 ntBASIC11.5□□□□□ -0.57
Hoxd8P23463 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Hoxd8P23463 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Hoxd8P23463 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms