Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 AC154197.1-201ENSMUST00000225136 1382 ntBASIC12.81□□□□□ -0.36
Col1a1P11087 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.81□□□□□ -0.36
Col1a1P11087 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col1a1P11087 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col1a1P11087 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col1a1P11087 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col1a1P11087 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Col1a1P11087 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col1a1P11087 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col1a1P11087 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC12.81□□□□□ -0.36
Col1a1P11087 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col1a1P11087 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col1a1P11087 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Col1a1P11087 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col1a1P11087 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC12.8□□□□□ -0.36
Col1a1P11087 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Col1a1P11087 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Col1a1P11087 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col1a1P11087 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC12.8□□□□□ -0.36
Col1a1P11087 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col1a1P11087 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col1a1P11087 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.8□□□□□ -0.36
Col1a1P11087 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col1a1P11087 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col1a1P11087 Mir598-201ENSMUST00000102094 79 ntBASIC12.8□□□□□ -0.36
Col1a1P11087 Gm12397-201ENSMUST00000117674 615 ntBASIC12.8□□□□□ -0.36
Col1a1P11087 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col1a1P11087 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col1a1P11087 Gm26957-201ENSMUST00000182645 977 ntBASIC12.8□□□□□ -0.36
Col1a1P11087 Gm21631-201ENSMUST00000195041 754 ntBASIC12.8□□□□□ -0.36
Col1a1P11087 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC12.8□□□□□ -0.36
Col1a1P11087 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC12.8□□□□□ -0.36
Col1a1P11087 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC12.8□□□□□ -0.36
Col1a1P11087 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC12.8□□□□□ -0.36
Col1a1P11087 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Col1a1P11087 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col1a1P11087 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col1a1P11087 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col1a1P11087 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col1a1P11087 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col1a1P11087 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col1a1P11087 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.8□□□□□ -0.36
Col1a1P11087 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col1a1P11087 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col1a1P11087 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col1a1P11087 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC12.8□□□□□ -0.36
Col1a1P11087 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC12.8□□□□□ -0.36
Col1a1P11087 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col1a1P11087 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col1a1P11087 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col1a1P11087 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col1a1P11087 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col1a1P11087 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col1a1P11087 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col1a1P11087 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Col1a1P11087 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col1a1P11087 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col1a1P11087 Gm14571-201ENSMUST00000118292 570 ntBASIC12.79□□□□□ -0.36
Col1a1P11087 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC12.79□□□□□ -0.36
Col1a1P11087 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC12.79□□□□□ -0.36
Col1a1P11087 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col1a1P11087 Gm24074-201ENSMUST00000158178 260 ntBASIC12.79□□□□□ -0.36
Col1a1P11087 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC12.79□□□□□ -0.36
Col1a1P11087 Gm18182-201ENSMUST00000191380 1251 ntBASIC12.79□□□□□ -0.36
Col1a1P11087 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC12.79□□□□□ -0.36
Col1a1P11087 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC12.79□□□□□ -0.36
Col1a1P11087 Gm40332-201ENSMUST00000199847 938 ntBASIC12.79□□□□□ -0.36
Col1a1P11087 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC12.79□□□□□ -0.36
Col1a1P11087 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC12.79□□□□□ -0.36
Col1a1P11087 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Col1a1P11087 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Col1a1P11087 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col1a1P11087 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col1a1P11087 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Col1a1P11087 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Col1a1P11087 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col1a1P11087 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col1a1P11087 Gm4865-201ENSMUST00000196284 1309 ntBASIC12.79□□□□□ -0.36
Col1a1P11087 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col1a1P11087 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col1a1P11087 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col1a1P11087 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.79□□□□□ -0.36
Col1a1P11087 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col1a1P11087 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col1a1P11087 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Col1a1P11087 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col1a1P11087 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col1a1P11087 Deup1-201ENSMUST00000045513 2583 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Col1a1P11087 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Col1a1P11087 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col1a1P11087 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Col1a1P11087 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col1a1P11087 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col1a1P11087 Gm6276-201ENSMUST00000120159 579 ntBASIC12.78□□□□□ -0.36
Col1a1P11087 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col1a1P11087 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC12.78□□□□□ -0.36
Col1a1P11087 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col1a1P11087 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col1a1P11087 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC12.78□□□□□ -0.36
Col1a1P11087 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 130.4 ms