Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Gm14395-201ENSMUST00000120494 563 ntBASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Gm12516-201ENSMUST00000120819 385 ntBASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Gm13182-201ENSMUST00000122241 312 ntBASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Gm14665-201ENSMUST00000122294 557 ntBASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Gm24992-201ENSMUST00000157412 130 ntBASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.03□□□□□ -0.48
Chmp6P0C0A3 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Gm42657-201ENSMUST00000201746 211 ntBASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Gm8285-201ENSMUST00000208293 759 ntBASIC12.03□□□□□ -0.48
Chmp6P0C0A3 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp6P0C0A3 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chmp6P0C0A3 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.02□□□□□ -0.48
Chmp6P0C0A3 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.48
Chmp6P0C0A3 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Chmp6P0C0A3 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chmp6P0C0A3 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chmp6P0C0A3 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp6P0C0A3 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Gm11451-201ENSMUST00000118946 630 ntBASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Gm15374-201ENSMUST00000119313 844 ntBASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Gm22846-201ENSMUST00000157706 270 ntBASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Gm24398-201ENSMUST00000157870 109 ntBASIC12.02□□□□□ -0.49
Chmp6P0C0A3 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Gm21778-201ENSMUST00000178779 471 ntBASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.02□□□□□ -0.49
Chmp6P0C0A3 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Gm8365-201ENSMUST00000197334 648 ntBASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.02□□□□□ -0.49
Chmp6P0C0A3 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Mt1-202ENSMUST00000211807 1085 ntBASIC12.02□□□□□ -0.49
Chmp6P0C0A3 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.02□□□□□ -0.49
Chmp6P0C0A3 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp6P0C0A3 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp6P0C0A3 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms