Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc9P09633 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc9P09633 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc9P09633 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc9P09633 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc9P09633 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc9P09633 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc9P09633 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc9P09633 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc9P09633 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc9P09633 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc9P09633 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC14.23□□□□□ -0.13
Hoxc9P09633 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc9P09633 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC14.23□□□□□ -0.13
Hoxc9P09633 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hoxc9P09633 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc9P09633 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Hoxc9P09633 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Hoxc9P09633 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc9P09633 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc9P09633 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc9P09633 Gm8876-201ENSMUST00000120768 1122 ntBASIC14.23□□□□□ -0.13
Hoxc9P09633 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hoxc9P09633 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc9P09633 Gm5274-201ENSMUST00000182641 1003 ntBASIC14.23□□□□□ -0.13
Hoxc9P09633 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC14.23□□□□□ -0.13
Hoxc9P09633 Gm38313-201ENSMUST00000191953 1266 ntBASIC14.23□□□□□ -0.13
Hoxc9P09633 Gm2345-201ENSMUST00000193451 589 ntBASIC14.23□□□□□ -0.13
Hoxc9P09633 Ighv1-70-201ENSMUST00000196509 351 ntBASIC14.23□□□□□ -0.13
Hoxc9P09633 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC14.23□□□□□ -0.13
Hoxc9P09633 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC14.23□□□□□ -0.13
Hoxc9P09633 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc9P09633 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc9P09633 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC14.23□□□□□ -0.13
Hoxc9P09633 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc9P09633 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc9P09633 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc9P09633 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc9P09633 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc9P09633 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc9P09633 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC14.23□□□□□ -0.13
Hoxc9P09633 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc9P09633 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc9P09633 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc9P09633 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc9P09633 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc9P09633 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc9P09633 Gm12716-201ENSMUST00000120606 1354 ntBASIC14.22□□□□□ -0.13
Hoxc9P09633 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc9P09633 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc9P09633 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Hoxc9P09633 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Hoxc9P09633 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc9P09633 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc9P09633 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc9P09633 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hoxc9P09633 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC14.22□□□□□ -0.13
Hoxc9P09633 Gm8643-201ENSMUST00000195228 625 ntBASIC14.22□□□□□ -0.13
Hoxc9P09633 Gm42511-201ENSMUST00000196160 234 ntBASIC14.22□□□□□ -0.13
Hoxc9P09633 Gm6439-201ENSMUST00000199849 862 ntBASIC14.22□□□□□ -0.13
Hoxc9P09633 Gm42803-201ENSMUST00000201051 451 ntBASIC14.22□□□□□ -0.13
Hoxc9P09633 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC14.22□□□□□ -0.13
Hoxc9P09633 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc9P09633 AC134860.2-201ENSMUST00000225277 1036 ntBASIC14.22□□□□□ -0.13
Hoxc9P09633 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc9P09633 Atf7-201ENSMUST00000096143 390 ntBASIC14.22□□□□□ -0.13
Hoxc9P09633 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc9P09633 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
Hoxc9P09633 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC14.22□□□□□ -0.13
Hoxc9P09633 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc9P09633 Gm42971-201ENSMUST00000199228 2079 ntBASIC14.22□□□□□ -0.13
Hoxc9P09633 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc9P09633 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC14.22□□□□□ -0.13
Hoxc9P09633 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc9P09633 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC14.22□□□□□ -0.13
Hoxc9P09633 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hoxc9P09633 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hoxc9P09633 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc9P09633 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Hoxc9P09633 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc9P09633 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc9P09633 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc9P09633 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc9P09633 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc9P09633 Gm5697-201ENSMUST00000122295 2482 ntBASIC14.21□□□□□ -0.13
Hoxc9P09633 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc9P09633 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc9P09633 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc9P09633 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC14.21□□□□□ -0.13
Hoxc9P09633 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc9P09633 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Hoxc9P09633 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC14.21□□□□□ -0.13
Hoxc9P09633 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc9P09633 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC14.21□□□□□ -0.13
Hoxc9P09633 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC14.21□□□□□ -0.13
Hoxc9P09633 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc9P09633 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc9P09633 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc9P09633 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC14.21□□□□□ -0.13
Hoxc9P09633 Gm12397-201ENSMUST00000117674 615 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms