Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Gm3283-201ENSMUST00000199319 1350 ntBASIC13.37□□□□□ -0.27
NpcdF8VQB8 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Gm12947-201ENSMUST00000116114 420 ntBASIC13.37□□□□□ -0.27
NpcdF8VQB8 Gm14398-201ENSMUST00000117287 1073 ntBASIC13.37□□□□□ -0.27
NpcdF8VQB8 Gm15626-201ENSMUST00000117478 868 ntBASIC13.37□□□□□ -0.27
NpcdF8VQB8 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Gm4917-201ENSMUST00000121452 650 ntBASIC13.37□□□□□ -0.27
NpcdF8VQB8 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC13.37□□□□□ -0.27
NpcdF8VQB8 Gm11960-201ENSMUST00000122068 925 ntBASIC13.37□□□□□ -0.27
NpcdF8VQB8 Gm5526-201ENSMUST00000153604 423 ntBASIC13.37□□□□□ -0.27
NpcdF8VQB8 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Gm18014-201ENSMUST00000183369 817 ntBASIC13.37□□□□□ -0.27
NpcdF8VQB8 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Gm43460-201ENSMUST00000202491 1057 ntBASIC13.37□□□□□ -0.27
NpcdF8VQB8 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Gm10020-201ENSMUST00000081993 612 ntBASIC13.37□□□□□ -0.27
NpcdF8VQB8 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
NpcdF8VQB8 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC13.36□□□□□ -0.27
NpcdF8VQB8 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NpcdF8VQB8 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NpcdF8VQB8 Gm37651-201ENSMUST00000194679 1494 ntBASIC13.36□□□□□ -0.27
NpcdF8VQB8 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NpcdF8VQB8 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NpcdF8VQB8 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NpcdF8VQB8 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NpcdF8VQB8 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
NpcdF8VQB8 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NpcdF8VQB8 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.36□□□□□ -0.27
NpcdF8VQB8 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NpcdF8VQB8 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC13.36□□□□□ -0.27
NpcdF8VQB8 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC13.36□□□□□ -0.27
NpcdF8VQB8 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC13.36□□□□□ -0.27
NpcdF8VQB8 Gm26943-201ENSMUST00000182295 957 ntBASIC13.36□□□□□ -0.27
NpcdF8VQB8 Gm19927-201ENSMUST00000185792 781 ntBASIC13.36□□□□□ -0.27
NpcdF8VQB8 Gm37858-201ENSMUST00000192759 1231 ntBASIC13.36□□□□□ -0.27
NpcdF8VQB8 Gm8643-201ENSMUST00000195228 625 ntBASIC13.36□□□□□ -0.27
NpcdF8VQB8 Gm43564-201ENSMUST00000196185 211 ntBASIC13.36□□□□□ -0.27
NpcdF8VQB8 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NpcdF8VQB8 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NpcdF8VQB8 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NpcdF8VQB8 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NpcdF8VQB8 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NpcdF8VQB8 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.36□□□□□ -0.27
NpcdF8VQB8 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.36□□□□□ -0.27
NpcdF8VQB8 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NpcdF8VQB8 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC13.36□□□□□ -0.27
NpcdF8VQB8 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NpcdF8VQB8 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC13.36□□□□□ -0.27
NpcdF8VQB8 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NpcdF8VQB8 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NpcdF8VQB8 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Gm6441-201ENSMUST00000120983 696 ntBASIC13.35□□□□□ -0.27
NpcdF8VQB8 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NpcdF8VQB8 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms