Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Atf6F6VAN0 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atf6F6VAN0 AC107453.4-201ENSMUST00000227068 1817 ntBASIC11.37□□□□□ -0.59
Atf6F6VAN0 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atf6F6VAN0 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atf6F6VAN0 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atf6F6VAN0 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atf6F6VAN0 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atf6F6VAN0 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atf6F6VAN0 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC11.36□□□□□ -0.59
Atf6F6VAN0 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.36□□□□□ -0.59
Atf6F6VAN0 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atf6F6VAN0 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.36□□□□□ -0.59
Atf6F6VAN0 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Atf6F6VAN0 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.36□□□□□ -0.59
Atf6F6VAN0 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.36□□□□□ -0.59
Atf6F6VAN0 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.36□□□□□ -0.59
Atf6F6VAN0 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.36□□□□□ -0.59
Atf6F6VAN0 Gm9133-201ENSMUST00000118289 540 ntBASIC11.36□□□□□ -0.59
Atf6F6VAN0 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atf6F6VAN0 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atf6F6VAN0 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Atf6F6VAN0 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.36□□□□□ -0.59
Atf6F6VAN0 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Atf6F6VAN0 Gm37458-201ENSMUST00000194055 410 ntBASIC11.36□□□□□ -0.59
Atf6F6VAN0 Gm9645-201ENSMUST00000197131 792 ntBASIC11.36□□□□□ -0.59
Atf6F6VAN0 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.36□□□□□ -0.59
Atf6F6VAN0 Gm44980-201ENSMUST00000205826 314 ntBASIC11.36□□□□□ -0.59
Atf6F6VAN0 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.36□□□□□ -0.59
Atf6F6VAN0 Gm10020-201ENSMUST00000081993 612 ntBASIC11.36□□□□□ -0.59
Atf6F6VAN0 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.36□□□□□ -0.59
Atf6F6VAN0 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Atf6F6VAN0 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.36□□□□□ -0.59
Atf6F6VAN0 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Atf6F6VAN0 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.36□□□□□ -0.59
Atf6F6VAN0 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atf6F6VAN0 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atf6F6VAN0 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Atf6F6VAN0 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Atf6F6VAN0 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Atf6F6VAN0 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atf6F6VAN0 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atf6F6VAN0 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.35□□□□□ -0.59
Atf6F6VAN0 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.35□□□□□ -0.59
Atf6F6VAN0 Gm16071-201ENSMUST00000119589 793 ntBASIC11.35□□□□□ -0.59
Atf6F6VAN0 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Gm24074-201ENSMUST00000158178 260 ntBASIC11.35□□□□□ -0.59
Atf6F6VAN0 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Gm17826-201ENSMUST00000189720 798 ntBASIC11.35□□□□□ -0.59
Atf6F6VAN0 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Gm36991-201ENSMUST00000191800 648 ntBASIC11.35□□□□□ -0.59
Atf6F6VAN0 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.35□□□□□ -0.59
Atf6F6VAN0 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Gm43138-201ENSMUST00000199123 708 ntBASIC11.35□□□□□ -0.59
Atf6F6VAN0 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC11.35□□□□□ -0.59
Atf6F6VAN0 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Atf6F6VAN0 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.35□□□□□ -0.59
Atf6F6VAN0 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Atf6F6VAN0 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.35□□□□□ -0.59
Atf6F6VAN0 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Atf6F6VAN0 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atf6F6VAN0 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms