Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scaf11E9PZM7 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scaf11E9PZM7 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scaf11E9PZM7 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scaf11E9PZM7 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scaf11E9PZM7 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Scaf11E9PZM7 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Scaf11E9PZM7 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scaf11E9PZM7 Gm38034-201ENSMUST00000193915 2069 ntBASIC15.21■□□□□ 0.02
Scaf11E9PZM7 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scaf11E9PZM7 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Scaf11E9PZM7 3110001I22Rik-201ENSMUST00000035426 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scaf11E9PZM7 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scaf11E9PZM7 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scaf11E9PZM7 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Gm12047-201ENSMUST00000117561 944 ntBASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Gm12136-201ENSMUST00000120460 1209 ntBASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Gm5766-202ENSMUST00000161633 799 ntBASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Gm28391-201ENSMUST00000185202 379 ntBASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Gm29528-201ENSMUST00000186699 379 ntBASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Gm29526-201ENSMUST00000187217 379 ntBASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Taar1-201ENSMUST00000051532 1114 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Rdh7-201ENSMUST00000047199 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Ifna6-201ENSMUST00000105146 570 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Ube2l3-203ENSMUST00000115700 571 ntTSL 5 BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Gm15720-201ENSMUST00000117133 282 ntBASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC15.2■□□□□ 0.02
Scaf11E9PZM7 n-R5s154-201ENSMUST00000122513 108 ntBASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Gm15664-201ENSMUST00000160167 184 ntBASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Ifna11-201ENSMUST00000170428 573 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Gm18299-201ENSMUST00000192026 636 ntBASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Gm44460-201ENSMUST00000196179 129 ntBASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Gm43103-201ENSMUST00000199021 802 ntBASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Gm2566-201ENSMUST00000201267 431 ntBASIC15.2■□□□□ 0.02
Scaf11E9PZM7 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 AC132881.1-201ENSMUST00000223780 1062 ntBASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Phf5a-201ENSMUST00000023117 864 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Ifna1-201ENSMUST00000094972 570 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Scaf11E9PZM7 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Pck2-205ENSMUST00000226352 2784 ntBASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Adgrv1-214ENSMUST00000224088 1492 ntBASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Gm14538-201ENSMUST00000122019 1327 ntBASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Actg2-202ENSMUST00000121731 1273 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Gm26021-201ENSMUST00000158664 131 ntBASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Slirp-202ENSMUST00000160488 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scaf11E9PZM7 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Gm24466-201ENSMUST00000179978 109 ntBASIC15.19■□□□□ 0.02
Scaf11E9PZM7 D130017N08Rik-201ENSMUST00000180460 510 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scaf11E9PZM7 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Gm2021-201ENSMUST00000190623 464 ntBASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Gm19090-201ENSMUST00000218187 774 ntBASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Scaf11E9PZM7 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scaf11E9PZM7 Gm2238-201ENSMUST00000192074 3669 ntBASIC15.18■□□□□ 0.02
Scaf11E9PZM7 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scaf11E9PZM7 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scaf11E9PZM7 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms