Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Gm12165-201ENSMUST00000117047 342 ntBASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Gm14740-201ENSMUST00000118538 1150 ntBASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Gm18367-201ENSMUST00000176139 600 ntBASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 AC159002.1-201ENSMUST00000226714 924 ntBASIC9.39□□□□□ -0.91
Gm3550W4VSN7 AC131330.1-201ENSMUST00000227814 1015 ntBASIC9.39□□□□□ -0.91
Gm3550W4VSN7 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Gm9035-201ENSMUST00000218318 1697 ntBASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Gm3550W4VSN7 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Gm8111-201ENSMUST00000117659 987 ntBASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Gm15352-201ENSMUST00000118696 270 ntBASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Mup-ps29-201ENSMUST00000122281 202 ntBASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC9.38□□□□□ -0.91
Gm3550W4VSN7 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Gm37981-201ENSMUST00000194280 535 ntBASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Gm43186-201ENSMUST00000198130 824 ntBASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 AC166344.1-201ENSMUST00000223745 674 ntBASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Gm3550W4VSN7 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Gm3550W4VSN7 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Gm3550W4VSN7 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm3550W4VSN7 Gm44153-201ENSMUST00000204162 1580 ntBASIC9.37□□□□□ -0.91
Gm3550W4VSN7 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Gm3550W4VSN7 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm3550W4VSN7 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms