Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm22495-201ENSMUST00000104492 126 ntBASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Gm24294-201ENSMUST00000158295 277 ntBASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Gm16547-201ENSMUST00000159474 293 ntBASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Gm30055-201ENSMUST00000203175 803 ntBASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Gm44124-201ENSMUST00000204159 472 ntBASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Wbp1-209ENSMUST00000205023 716 ntBASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 AC154213.1-201ENSMUST00000228234 583 ntBASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 AC154354.1-203ENSMUST00000225565 1364 ntBASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Gm19246-201ENSMUST00000173599 255 ntBASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Ap1g1-206ENSMUST00000179104 1096 ntBASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Mir6359-201ENSMUST00000183668 81 ntBASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Gm4753-201ENSMUST00000188327 1255 ntBASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Gm37723-201ENSMUST00000194480 565 ntBASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.47□□□□□ -0.73
Nkx6-1Q99MA9 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms