Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC13.66□□□□□ -0.22
RtcbQ99LF4 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC13.66□□□□□ -0.22
RtcbQ99LF4 Gm9619-201ENSMUST00000211587 762 ntBASIC13.66□□□□□ -0.22
RtcbQ99LF4 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC13.66□□□□□ -0.22
RtcbQ99LF4 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC13.66□□□□□ -0.22
RtcbQ99LF4 Gm7242-201ENSMUST00000221134 705 ntBASIC13.66□□□□□ -0.22
RtcbQ99LF4 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RtcbQ99LF4 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
RtcbQ99LF4 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
RtcbQ99LF4 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RtcbQ99LF4 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RtcbQ99LF4 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC13.66□□□□□ -0.22
RtcbQ99LF4 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RtcbQ99LF4 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RtcbQ99LF4 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RtcbQ99LF4 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.66□□□□□ -0.22
RtcbQ99LF4 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RtcbQ99LF4 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RtcbQ99LF4 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RtcbQ99LF4 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RtcbQ99LF4 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.65□□□□□ -0.22
RtcbQ99LF4 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Gm13608-201ENSMUST00000121807 1406 ntBASIC13.65□□□□□ -0.22
RtcbQ99LF4 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC13.65□□□□□ -0.22
RtcbQ99LF4 Gm14176-201ENSMUST00000121302 477 ntBASIC13.65□□□□□ -0.22
RtcbQ99LF4 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Gm20614-201ENSMUST00000177106 632 ntBASIC13.65□□□□□ -0.22
RtcbQ99LF4 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Gm26943-201ENSMUST00000182295 957 ntBASIC13.65□□□□□ -0.22
RtcbQ99LF4 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Gm38038-201ENSMUST00000193803 259 ntBASIC13.65□□□□□ -0.22
RtcbQ99LF4 Gm43117-201ENSMUST00000198531 379 ntBASIC13.65□□□□□ -0.22
RtcbQ99LF4 Gm5738-201ENSMUST00000206016 779 ntBASIC13.65□□□□□ -0.22
RtcbQ99LF4 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Gm8170-201ENSMUST00000218581 945 ntBASIC13.65□□□□□ -0.22
RtcbQ99LF4 AC125409.3-201ENSMUST00000223488 653 ntBASIC13.65□□□□□ -0.22
RtcbQ99LF4 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RtcbQ99LF4 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RtcbQ99LF4 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RtcbQ99LF4 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.65□□□□□ -0.23
RtcbQ99LF4 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
RtcbQ99LF4 Gm8725-201ENSMUST00000221829 1333 ntBASIC13.64□□□□□ -0.23
RtcbQ99LF4 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Gm37058-201ENSMUST00000193393 1644 ntBASIC13.64□□□□□ -0.23
RtcbQ99LF4 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.64□□□□□ -0.23
RtcbQ99LF4 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC13.64□□□□□ -0.23
RtcbQ99LF4 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RtcbQ99LF4 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RtcbQ99LF4 Gm43667-201ENSMUST00000198616 1095 ntBASIC13.64□□□□□ -0.23
RtcbQ99LF4 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms