Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Col20a1Q923P0 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Col20a1Q923P0 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col20a1Q923P0 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC13.04□□□□□ -0.32
Col20a1Q923P0 Gm6758-201ENSMUST00000119643 1055 ntBASIC13.04□□□□□ -0.32
Col20a1Q923P0 Mipep-ps-201ENSMUST00000177439 291 ntBASIC13.04□□□□□ -0.32
Col20a1Q923P0 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col20a1Q923P0 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC13.04□□□□□ -0.32
Col20a1Q923P0 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC13.04□□□□□ -0.32
Col20a1Q923P0 Gm5267-201ENSMUST00000191574 1045 ntBASIC13.04□□□□□ -0.32
Col20a1Q923P0 Gm40414-201ENSMUST00000197608 481 ntBASIC13.04□□□□□ -0.32
Col20a1Q923P0 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Col20a1Q923P0 Gm18204-201ENSMUST00000209835 793 ntBASIC13.04□□□□□ -0.32
Col20a1Q923P0 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
Col20a1Q923P0 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Col20a1Q923P0 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col20a1Q923P0 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Col20a1Q923P0 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC13.04□□□□□ -0.32
Col20a1Q923P0 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col20a1Q923P0 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC13.04□□□□□ -0.32
Col20a1Q923P0 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col20a1Q923P0 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col20a1Q923P0 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col20a1Q923P0 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Gm11475-201ENSMUST00000118482 476 ntBASIC13.03□□□□□ -0.32
Col20a1Q923P0 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC13.03□□□□□ -0.32
Col20a1Q923P0 Gm15136-201ENSMUST00000120552 533 ntBASIC13.03□□□□□ -0.32
Col20a1Q923P0 Gm11993-201ENSMUST00000121861 820 ntBASIC13.03□□□□□ -0.32
Col20a1Q923P0 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Gm9162-201ENSMUST00000182081 991 ntBASIC13.03□□□□□ -0.32
Col20a1Q923P0 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Gm18539-201ENSMUST00000204745 1090 ntBASIC13.03□□□□□ -0.32
Col20a1Q923P0 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Gm8162-201ENSMUST00000213951 665 ntBASIC13.03□□□□□ -0.32
Col20a1Q923P0 AC162932.1-201ENSMUST00000219209 872 ntBASIC13.03□□□□□ -0.32
Col20a1Q923P0 CT025679.1-201ENSMUST00000227106 449 ntBASIC13.03□□□□□ -0.32
Col20a1Q923P0 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Gfra2-203ENSMUST00000227697 1323 ntBASIC13.03□□□□□ -0.32
Col20a1Q923P0 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC13.03□□□□□ -0.32
Col20a1Q923P0 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col20a1Q923P0 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col20a1Q923P0 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col20a1Q923P0 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col20a1Q923P0 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col20a1Q923P0 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Col20a1Q923P0 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col20a1Q923P0 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col20a1Q923P0 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col20a1Q923P0 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Col20a1Q923P0 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col20a1Q923P0 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.32
Col20a1Q923P0 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Col20a1Q923P0 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col20a1Q923P0 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Col20a1Q923P0 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col20a1Q923P0 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col20a1Q923P0 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC13.02□□□□□ -0.33
Col20a1Q923P0 Gm23400-201ENSMUST00000174994 102 ntBASIC13.02□□□□□ -0.33
Col20a1Q923P0 Gm23647-201ENSMUST00000175042 109 ntBASIC13.02□□□□□ -0.33
Col20a1Q923P0 Gm26463-201ENSMUST00000175065 101 ntBASIC13.02□□□□□ -0.33
Col20a1Q923P0 Gm24332-201ENSMUST00000175102 102 ntBASIC13.02□□□□□ -0.33
Col20a1Q923P0 Gm25959-201ENSMUST00000175112 102 ntBASIC13.02□□□□□ -0.33
Col20a1Q923P0 Gm22475-201ENSMUST00000175169 102 ntBASIC13.02□□□□□ -0.33
Col20a1Q923P0 Gm22903-201ENSMUST00000175193 102 ntBASIC13.02□□□□□ -0.33
Col20a1Q923P0 Gm25070-201ENSMUST00000175237 102 ntBASIC13.02□□□□□ -0.33
Col20a1Q923P0 Gm24159-201ENSMUST00000175264 102 ntBASIC13.02□□□□□ -0.33
Col20a1Q923P0 Gm25299-201ENSMUST00000175283 102 ntBASIC13.02□□□□□ -0.33
Col20a1Q923P0 Gm23798-201ENSMUST00000175560 102 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms