Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Snora68-201ENSMUST00000104375 131 ntBASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Gm12684-201ENSMUST00000118675 999 ntBASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Gm8876-201ENSMUST00000120768 1122 ntBASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Mipep-ps-201ENSMUST00000177439 291 ntBASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Gm8525-201ENSMUST00000189674 861 ntBASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Gm9409-201ENSMUST00000197017 316 ntBASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Gm40332-201ENSMUST00000199847 938 ntBASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Gm5650-201ENSMUST00000209641 598 ntBASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trnp1Q80ZI1 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Gm15373-201ENSMUST00000121495 214 ntBASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Gm22662-201ENSMUST00000175290 256 ntBASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Gm8615-201ENSMUST00000025307 771 ntBASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trnp1Q80ZI1 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trnp1Q80ZI1 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trnp1Q80ZI1 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trnp1Q80ZI1 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trnp1Q80ZI1 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trnp1Q80ZI1 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trnp1Q80ZI1 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trnp1Q80ZI1 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trnp1Q80ZI1 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trnp1Q80ZI1 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trnp1Q80ZI1 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trnp1Q80ZI1 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trnp1Q80ZI1 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.4□□□□□ -0.42
Trnp1Q80ZI1 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trnp1Q80ZI1 Defa-ps17-201ENSMUST00000121849 171 ntBASIC12.4□□□□□ -0.42
Trnp1Q80ZI1 Gm15793-201ENSMUST00000121857 495 ntBASIC12.4□□□□□ -0.42
Trnp1Q80ZI1 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC12.4□□□□□ -0.42
Trnp1Q80ZI1 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trnp1Q80ZI1 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms