Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 AC154589.2-201ENSMUST00000228847 251 ntBASIC12.91□□□□□ -0.34
Smarcc2Q6PDG5 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Smarcc2Q6PDG5 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Smarcc2Q6PDG5 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcc2Q6PDG5 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC12.91□□□□□ -0.34
Smarcc2Q6PDG5 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcc2Q6PDG5 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.91□□□□□ -0.34
Smarcc2Q6PDG5 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcc2Q6PDG5 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC12.91□□□□□ -0.34
Smarcc2Q6PDG5 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.91□□□□□ -0.34
Smarcc2Q6PDG5 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcc2Q6PDG5 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcc2Q6PDG5 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcc2Q6PDG5 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcc2Q6PDG5 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcc2Q6PDG5 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcc2Q6PDG5 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcc2Q6PDG5 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcc2Q6PDG5 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcc2Q6PDG5 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcc2Q6PDG5 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Smarcc2Q6PDG5 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcc2Q6PDG5 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcc2Q6PDG5 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcc2Q6PDG5 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcc2Q6PDG5 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcc2Q6PDG5 Gm25766-201ENSMUST00000104101 131 ntBASIC12.9□□□□□ -0.34
Smarcc2Q6PDG5 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcc2Q6PDG5 Gm12899-201ENSMUST00000120565 551 ntBASIC12.9□□□□□ -0.34
Smarcc2Q6PDG5 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcc2Q6PDG5 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcc2Q6PDG5 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcc2Q6PDG5 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.9□□□□□ -0.34
Smarcc2Q6PDG5 Gm9358-201ENSMUST00000183067 927 ntBASIC12.9□□□□□ -0.34
Smarcc2Q6PDG5 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.9□□□□□ -0.34
Smarcc2Q6PDG5 Gm34023-201ENSMUST00000195539 217 ntBASIC12.9□□□□□ -0.34
Smarcc2Q6PDG5 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC12.9□□□□□ -0.34
Smarcc2Q6PDG5 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Smarcc2Q6PDG5 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcc2Q6PDG5 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
Smarcc2Q6PDG5 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcc2Q6PDG5 Gm5739-201ENSMUST00000208601 1703 ntBASIC12.9□□□□□ -0.34
Smarcc2Q6PDG5 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Smarcc2Q6PDG5 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smarcc2Q6PDG5 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Smarcc2Q6PDG5 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Smarcc2Q6PDG5 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Mir1956-201ENSMUST00000157748 65 ntBASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Gm45219-201ENSMUST00000205602 465 ntBASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Gm23680-201ENSMUST00000083162 164 ntBASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Gm42815-201ENSMUST00000198787 1470 ntBASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Gm37954-201ENSMUST00000195400 2071 ntBASIC12.89□□□□□ -0.35
Smarcc2Q6PDG5 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Gm45165-201ENSMUST00000207763 1631 ntBASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcc2Q6PDG5 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms