Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Casc4Q6P2L7 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Gm44323-201ENSMUST00000198689 129 ntBASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Gm8285-201ENSMUST00000208293 759 ntBASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.22□□□□□ -0.61
Casc4Q6P2L7 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Casc4Q6P2L7 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Casc4Q6P2L7 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
Casc4Q6P2L7 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Casc4Q6P2L7 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Casc4Q6P2L7 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Casc4Q6P2L7 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Casc4Q6P2L7 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.61
Casc4Q6P2L7 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Casc4Q6P2L7 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Casc4Q6P2L7 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Casc4Q6P2L7 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Casc4Q6P2L7 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.21□□□□□ -0.61
Casc4Q6P2L7 Gm19246-201ENSMUST00000173599 255 ntBASIC11.21□□□□□ -0.61
Casc4Q6P2L7 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.21□□□□□ -0.61
Casc4Q6P2L7 Gm24514-201ENSMUST00000174961 285 ntBASIC11.21□□□□□ -0.61
Casc4Q6P2L7 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Casc4Q6P2L7 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Casc4Q6P2L7 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.21□□□□□ -0.61
Casc4Q6P2L7 Gm18561-201ENSMUST00000206027 804 ntBASIC11.21□□□□□ -0.61
Casc4Q6P2L7 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Casc4Q6P2L7 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.21□□□□□ -0.61
Casc4Q6P2L7 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.21□□□□□ -0.61
Casc4Q6P2L7 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Casc4Q6P2L7 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Casc4Q6P2L7 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Casc4Q6P2L7 Gm10263-201ENSMUST00000085163 300 ntBASIC11.21□□□□□ -0.61
Casc4Q6P2L7 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Casc4Q6P2L7 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.62
Casc4Q6P2L7 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Casc4Q6P2L7 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Casc4Q6P2L7 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Casc4Q6P2L7 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Casc4Q6P2L7 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Casc4Q6P2L7 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Casc4Q6P2L7 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Casc4Q6P2L7 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Casc4Q6P2L7 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Casc4Q6P2L7 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms