Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.76□□□□□ -0.53
Syne3Q4FZC9 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Gm15617-201ENSMUST00000118973 771 ntBASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Gm22334-201ENSMUST00000158070 133 ntBASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Gm23694-201ENSMUST00000179335 110 ntBASIC11.75□□□□□ -0.53
Syne3Q4FZC9 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Gm37299-201ENSMUST00000193951 826 ntBASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Gm3786-201ENSMUST00000202659 378 ntBASIC11.75□□□□□ -0.53
Syne3Q4FZC9 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Syne3Q4FZC9 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Gm8302-201ENSMUST00000119217 852 ntBASIC11.74□□□□□ -0.53
Syne3Q4FZC9 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Gm9353-201ENSMUST00000200472 604 ntBASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Gm42867-201ENSMUST00000202995 469 ntBASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Gm45770-201ENSMUST00000212105 616 ntBASIC11.74□□□□□ -0.53
Syne3Q4FZC9 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms