Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28047Q3US59 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28047Q3US59 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.56□□□□□ -0.4
Gm28047Q3US59 AC154461.3-201ENSMUST00000224831 573 ntBASIC12.56□□□□□ -0.4
Gm28047Q3US59 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.56□□□□□ -0.4
Gm28047Q3US59 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Gfra2-203ENSMUST00000227697 1323 ntBASIC12.56□□□□□ -0.4
Gm28047Q3US59 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Gm28047Q3US59 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gm28047Q3US59 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28047Q3US59 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28047Q3US59 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Gm28047Q3US59 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28047Q3US59 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28047Q3US59 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28047Q3US59 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.55□□□□□ -0.4
Gm28047Q3US59 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28047Q3US59 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28047Q3US59 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28047Q3US59 Gm23061-201ENSMUST00000102348 116 ntBASIC12.55□□□□□ -0.4
Gm28047Q3US59 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Gm28047Q3US59 Gm12136-201ENSMUST00000120460 1209 ntBASIC12.55□□□□□ -0.4
Gm28047Q3US59 Gm14585-201ENSMUST00000120713 634 ntBASIC12.55□□□□□ -0.4
Gm28047Q3US59 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28047Q3US59 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Gm28047Q3US59 Snord55-201ENSMUST00000174939 79 ntBASIC12.55□□□□□ -0.4
Gm28047Q3US59 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Gm28047Q3US59 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Gm28047Q3US59 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.55□□□□□ -0.4
Gm28047Q3US59 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28047Q3US59 Gm43930-201ENSMUST00000203868 845 ntBASIC12.55□□□□□ -0.4
Gm28047Q3US59 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28047Q3US59 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.55□□□□□ -0.4
Gm28047Q3US59 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Gm28047Q3US59 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.55□□□□□ -0.4
Gm28047Q3US59 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.55□□□□□ -0.4
Gm28047Q3US59 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC12.55□□□□□ -0.4
Gm28047Q3US59 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28047Q3US59 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28047Q3US59 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28047Q3US59 AC108416.1-201ENSMUST00000228755 1558 ntBASIC12.55□□□□□ -0.4
Gm28047Q3US59 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28047Q3US59 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28047Q3US59 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28047Q3US59 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Gm28047Q3US59 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28047Q3US59 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Gm28047Q3US59 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28047Q3US59 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28047Q3US59 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Gm28047Q3US59 Gm5308-201ENSMUST00000196752 1354 ntBASIC12.55□□□□□ -0.4
Gm28047Q3US59 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm28047Q3US59 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC12.55□□□□□ -0.4
Gm28047Q3US59 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Gm28047Q3US59 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28047Q3US59 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28047Q3US59 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Gm28047Q3US59 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28047Q3US59 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Gm28047Q3US59 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28047Q3US59 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Gm28047Q3US59 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC12.54□□□□□ -0.4
Gm28047Q3US59 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28047Q3US59 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28047Q3US59 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Gm28047Q3US59 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28047Q3US59 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm28047Q3US59 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Gm28047Q3US59 Gm13284-201ENSMUST00000121020 547 ntBASIC12.54□□□□□ -0.4
Gm28047Q3US59 Gm12570-201ENSMUST00000122047 1030 ntBASIC12.54□□□□□ -0.4
Gm28047Q3US59 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.54□□□□□ -0.4
Gm28047Q3US59 Gm25226-201ENSMUST00000158198 123 ntBASIC12.54□□□□□ -0.4
Gm28047Q3US59 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Gm28047Q3US59 Mipep-ps-201ENSMUST00000177439 291 ntBASIC12.54□□□□□ -0.4
Gm28047Q3US59 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.54□□□□□ -0.4
Gm28047Q3US59 Gm7985-201ENSMUST00000183329 981 ntBASIC12.54□□□□□ -0.4
Gm28047Q3US59 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.54□□□□□ -0.4
Gm28047Q3US59 Gm8197-202ENSMUST00000193422 934 ntBASIC12.54□□□□□ -0.4
Gm28047Q3US59 Gm32111-201ENSMUST00000207689 846 ntBASIC12.54□□□□□ -0.4
Gm28047Q3US59 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC12.54□□□□□ -0.4
Gm28047Q3US59 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC12.54□□□□□ -0.4
Gm28047Q3US59 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.54□□□□□ -0.4
Gm28047Q3US59 AC122035.1-201ENSMUST00000227576 1016 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms