Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.27□□□□□ -0.77
Cacna1aP97445 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cacna1aP97445 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
Cacna1aP97445 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cacna1aP97445 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cacna1aP97445 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cacna1aP97445 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cacna1aP97445 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cacna1aP97445 Ctsa-201ENSMUST00000017904 3674 ntAPPRIS P4 TSL 5 BASIC10.27□□□□□ -0.77
Cacna1aP97445 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cacna1aP97445 Gm9947-201ENSMUST00000067599 2920 ntBASIC10.27□□□□□ -0.77
Cacna1aP97445 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Cacna1aP97445 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cacna1aP97445 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Cacna1aP97445 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC10.26□□□□□ -0.77
Cacna1aP97445 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Cacna1aP97445 Gm4705-201ENSMUST00000177415 354 ntBASIC10.26□□□□□ -0.77
Cacna1aP97445 Gm42689-201ENSMUST00000202403 404 ntBASIC10.26□□□□□ -0.77
Cacna1aP97445 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC10.26□□□□□ -0.77
Cacna1aP97445 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Cacna1aP97445 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Cacna1aP97445 CT025618.1-201ENSMUST00000227409 1279 ntBASIC10.26□□□□□ -0.77
Cacna1aP97445 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Cacna1aP97445 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.26□□□□□ -0.77
Cacna1aP97445 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.26□□□□□ -0.77
Cacna1aP97445 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
Cacna1aP97445 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Cacna1aP97445 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Cacna1aP97445 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC10.26□□□□□ -0.77
Cacna1aP97445 Gm7928-201ENSMUST00000181249 701 ntBASIC10.26□□□□□ -0.77
Cacna1aP97445 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC10.26□□□□□ -0.77
Cacna1aP97445 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.26□□□□□ -0.77
Cacna1aP97445 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.26□□□□□ -0.77
Cacna1aP97445 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.26□□□□□ -0.77
Cacna1aP97445 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Cacna1aP97445 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Cacna1aP97445 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cacna1aP97445 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.25□□□□□ -0.77
Cacna1aP97445 Gm11700-201ENSMUST00000119409 403 ntBASIC10.25□□□□□ -0.77
Cacna1aP97445 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cacna1aP97445 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC10.25□□□□□ -0.77
Cacna1aP97445 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC10.25□□□□□ -0.77
Cacna1aP97445 Gm42660-201ENSMUST00000197733 947 ntBASIC10.25□□□□□ -0.77
Cacna1aP97445 Gm5040-201ENSMUST00000218609 800 ntBASIC10.25□□□□□ -0.77
Cacna1aP97445 AC117769.1-201ENSMUST00000224716 1120 ntBASIC10.25□□□□□ -0.77
Cacna1aP97445 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cacna1aP97445 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cacna1aP97445 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.25□□□□□ -0.77
Cacna1aP97445 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Cacna1aP97445 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cacna1aP97445 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cacna1aP97445 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cacna1aP97445 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cacna1aP97445 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC10.25□□□□□ -0.77
Cacna1aP97445 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cacna1aP97445 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.25□□□□□ -0.77
Cacna1aP97445 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cacna1aP97445 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC10.25□□□□□ -0.77
Cacna1aP97445 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cacna1aP97445 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cacna1aP97445 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cacna1aP97445 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cacna1aP97445 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cacna1aP97445 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cacna1aP97445 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cacna1aP97445 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Cacna1aP97445 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cacna1aP97445 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.25□□□□□ -0.77
Cacna1aP97445 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cacna1aP97445 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms