Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.16□□□□□ -0.46
Lig3P97386 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.16□□□□□ -0.46
Lig3P97386 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.16□□□□□ -0.46
Lig3P97386 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lig3P97386 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lig3P97386 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.16□□□□□ -0.46
Lig3P97386 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
Lig3P97386 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Lig3P97386 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lig3P97386 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lig3P97386 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lig3P97386 Gm37954-201ENSMUST00000195400 2071 ntBASIC12.16□□□□□ -0.46
Lig3P97386 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Lig3P97386 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lig3P97386 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Lig3P97386 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.16□□□□□ -0.46
Lig3P97386 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
Lig3P97386 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lig3P97386 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC12.16□□□□□ -0.46
Lig3P97386 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lig3P97386 Gm38117-201ENSMUST00000194653 939 ntBASIC12.16□□□□□ -0.46
Lig3P97386 Gm6108-201ENSMUST00000208365 367 ntBASIC12.16□□□□□ -0.46
Lig3P97386 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Lig3P97386 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.16□□□□□ -0.46
Lig3P97386 n-R5s185-201ENSMUST00000083953 119 ntBASIC12.16□□□□□ -0.46
Lig3P97386 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lig3P97386 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lig3P97386 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lig3P97386 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Lig3P97386 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.16□□□□□ -0.46
Lig3P97386 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lig3P97386 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lig3P97386 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lig3P97386 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lig3P97386 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.16□□□□□ -0.46
Lig3P97386 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Lig3P97386 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lig3P97386 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lig3P97386 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lig3P97386 Gm45161-201ENSMUST00000207316 2263 ntBASIC12.16□□□□□ -0.46
Lig3P97386 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Lig3P97386 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lig3P97386 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lig3P97386 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lig3P97386 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lig3P97386 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lig3P97386 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lig3P97386 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lig3P97386 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lig3P97386 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lig3P97386 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lig3P97386 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Lig3P97386 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lig3P97386 Gm28693-201ENSMUST00000189622 2638 ntBASIC12.15□□□□□ -0.46
Lig3P97386 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC12.15□□□□□ -0.46
Lig3P97386 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Lig3P97386 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.15□□□□□ -0.46
Lig3P97386 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lig3P97386 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.15□□□□□ -0.46
Lig3P97386 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lig3P97386 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lig3P97386 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lig3P97386 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lig3P97386 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.15□□□□□ -0.46
Lig3P97386 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.15□□□□□ -0.46
Lig3P97386 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Lig3P97386 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lig3P97386 Gm13019-201ENSMUST00000120000 276 ntBASIC12.15□□□□□ -0.46
Lig3P97386 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lig3P97386 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lig3P97386 Gm24248-201ENSMUST00000157321 322 ntBASIC12.15□□□□□ -0.46
Lig3P97386 Gm22846-201ENSMUST00000157706 270 ntBASIC12.15□□□□□ -0.46
Lig3P97386 Gm17214-201ENSMUST00000164501 541 ntBASIC12.15□□□□□ -0.46
Lig3P97386 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.15□□□□□ -0.46
Lig3P97386 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Lig3P97386 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Lig3P97386 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Lig3P97386 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Lig3P97386 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Lig3P97386 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Lig3P97386 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Lig3P97386 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lig3P97386 Gm19587-201ENSMUST00000191395 545 ntBASIC12.15□□□□□ -0.46
Lig3P97386 Gm29763-201ENSMUST00000205306 616 ntBASIC12.15□□□□□ -0.46
Lig3P97386 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.15□□□□□ -0.46
Lig3P97386 Gm6390-201ENSMUST00000215034 589 ntBASIC12.15□□□□□ -0.46
Lig3P97386 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC12.15□□□□□ -0.46
Lig3P97386 Gm40879-201ENSMUST00000220759 612 ntBASIC12.15□□□□□ -0.46
Lig3P97386 Gm14005-208ENSMUST00000223654 681 ntBASIC12.15□□□□□ -0.46
Lig3P97386 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.15□□□□□ -0.46
Lig3P97386 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lig3P97386 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lig3P97386 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lig3P97386 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Lig3P97386 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lig3P97386 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.15□□□□□ -0.46
Lig3P97386 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lig3P97386 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lig3P97386 CT868720.1-201ENSMUST00000223069 2544 ntBASIC12.15□□□□□ -0.46
Lig3P97386 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms