Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC9.95□□□□□ -0.82
SgcbP82349 Gm16337-201ENSMUST00000160368 917 ntTSL 3 BASIC9.95□□□□□ -0.82
SgcbP82349 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SgcbP82349 Gm6407-201ENSMUST00000176468 549 ntBASIC9.95□□□□□ -0.82
SgcbP82349 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
SgcbP82349 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC9.95□□□□□ -0.82
SgcbP82349 Gm44323-201ENSMUST00000198689 129 ntBASIC9.95□□□□□ -0.82
SgcbP82349 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC9.95□□□□□ -0.82
SgcbP82349 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SgcbP82349 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC9.95□□□□□ -0.82
SgcbP82349 Gm45166-201ENSMUST00000209073 683 ntBASIC9.95□□□□□ -0.82
SgcbP82349 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC9.95□□□□□ -0.82
SgcbP82349 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC9.95□□□□□ -0.82
SgcbP82349 Gm18377-201ENSMUST00000215141 607 ntBASIC9.95□□□□□ -0.82
SgcbP82349 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC9.95□□□□□ -0.82
SgcbP82349 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC9.95□□□□□ -0.82
SgcbP82349 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC9.95□□□□□ -0.82
SgcbP82349 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SgcbP82349 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC9.95□□□□□ -0.82
SgcbP82349 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
SgcbP82349 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SgcbP82349 AC158636.1-201ENSMUST00000220118 1393 ntBASIC9.95□□□□□ -0.82
SgcbP82349 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC9.95□□□□□ -0.82
SgcbP82349 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
SgcbP82349 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
SgcbP82349 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SgcbP82349 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SgcbP82349 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SgcbP82349 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SgcbP82349 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
SgcbP82349 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SgcbP82349 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC9.95□□□□□ -0.82
SgcbP82349 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
SgcbP82349 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC9.95□□□□□ -0.82
SgcbP82349 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SgcbP82349 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SgcbP82349 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SgcbP82349 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SgcbP82349 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SgcbP82349 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SgcbP82349 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
SgcbP82349 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SgcbP82349 Dhdh-201ENSMUST00000011526 5323 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SgcbP82349 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
SgcbP82349 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
SgcbP82349 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
SgcbP82349 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
SgcbP82349 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SgcbP82349 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SgcbP82349 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
SgcbP82349 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SgcbP82349 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SgcbP82349 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SgcbP82349 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SgcbP82349 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC9.94□□□□□ -0.82
SgcbP82349 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SgcbP82349 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
SgcbP82349 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
SgcbP82349 Gm8899-201ENSMUST00000214635 1332 ntBASIC9.94□□□□□ -0.82
SgcbP82349 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
SgcbP82349 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
SgcbP82349 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
SgcbP82349 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SgcbP82349 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
SgcbP82349 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC9.94□□□□□ -0.82
SgcbP82349 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
SgcbP82349 Gm12218-201ENSMUST00000117666 399 ntBASIC9.94□□□□□ -0.82
SgcbP82349 Gm12274-201ENSMUST00000120062 385 ntBASIC9.94□□□□□ -0.82
SgcbP82349 Gm15197-201ENSMUST00000120526 478 ntBASIC9.94□□□□□ -0.82
SgcbP82349 Gm12208-201ENSMUST00000122004 163 ntBASIC9.94□□□□□ -0.82
SgcbP82349 Mup-ps29-201ENSMUST00000122281 202 ntBASIC9.94□□□□□ -0.82
SgcbP82349 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SgcbP82349 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SgcbP82349 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SgcbP82349 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC9.94□□□□□ -0.82
SgcbP82349 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
SgcbP82349 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC9.94□□□□□ -0.82
SgcbP82349 Gm43163-201ENSMUST00000196571 442 ntBASIC9.94□□□□□ -0.82
SgcbP82349 Gm42816-201ENSMUST00000198433 325 ntBASIC9.94□□□□□ -0.82
SgcbP82349 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC9.94□□□□□ -0.82
SgcbP82349 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC9.94□□□□□ -0.82
SgcbP82349 AC114645.1-201ENSMUST00000215831 187 ntBASIC9.94□□□□□ -0.82
SgcbP82349 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC9.94□□□□□ -0.82
SgcbP82349 CT009527.1-201ENSMUST00000224205 339 ntBASIC9.94□□□□□ -0.82
SgcbP82349 AC164618.2-201ENSMUST00000224770 573 ntBASIC9.94□□□□□ -0.82
SgcbP82349 AC158388.1-201ENSMUST00000225441 256 ntBASIC9.94□□□□□ -0.82
SgcbP82349 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SgcbP82349 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SgcbP82349 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
SgcbP82349 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC9.94□□□□□ -0.82
SgcbP82349 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SgcbP82349 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
SgcbP82349 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SgcbP82349 Lrat-201ENSMUST00000029632 5351 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SgcbP82349 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SgcbP82349 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
SgcbP82349 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC9.94□□□□□ -0.82
SgcbP82349 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SgcbP82349 Gm6157-201ENSMUST00000199935 1897 ntBASIC9.93□□□□□ -0.82
SgcbP82349 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms