Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.29□□□□□ -0.6
Tubgcp3P58854 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.29□□□□□ -0.6
Tubgcp3P58854 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Gm25076-201ENSMUST00000104098 132 ntBASIC11.29□□□□□ -0.6
Tubgcp3P58854 Gm13422-201ENSMUST00000118834 504 ntBASIC11.29□□□□□ -0.6
Tubgcp3P58854 Gm11331-201ENSMUST00000119764 288 ntBASIC11.29□□□□□ -0.6
Tubgcp3P58854 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Gm16570-201ENSMUST00000161951 436 ntBASIC11.29□□□□□ -0.6
Tubgcp3P58854 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.29□□□□□ -0.6
Tubgcp3P58854 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.29□□□□□ -0.6
Tubgcp3P58854 Gm37826-201ENSMUST00000195329 322 ntBASIC11.29□□□□□ -0.6
Tubgcp3P58854 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.29□□□□□ -0.6
Tubgcp3P58854 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.29□□□□□ -0.6
Tubgcp3P58854 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.29□□□□□ -0.6
Tubgcp3P58854 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Tubgcp3P58854 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tubgcp3P58854 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.29□□□□□ -0.6
Tubgcp3P58854 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tubgcp3P58854 Gm5822-201ENSMUST00000161562 1378 ntBASIC11.28□□□□□ -0.6
Tubgcp3P58854 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubgcp3P58854 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Gm13611-201ENSMUST00000118269 318 ntBASIC11.28□□□□□ -0.6
Tubgcp3P58854 Gm13408-201ENSMUST00000119822 798 ntBASIC11.28□□□□□ -0.6
Tubgcp3P58854 Gm13935-201ENSMUST00000121859 798 ntBASIC11.28□□□□□ -0.6
Tubgcp3P58854 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.28□□□□□ -0.6
Tubgcp3P58854 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Gm24074-201ENSMUST00000158178 260 ntBASIC11.28□□□□□ -0.6
Tubgcp3P58854 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Tubgcp3P58854 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.28□□□□□ -0.6
Tubgcp3P58854 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.28□□□□□ -0.6
Tubgcp3P58854 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.28□□□□□ -0.6
Tubgcp3P58854 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Gm45398-201ENSMUST00000210561 165 ntBASIC11.28□□□□□ -0.6
Tubgcp3P58854 Saa-ps-201ENSMUST00000211148 320 ntBASIC11.28□□□□□ -0.6
Tubgcp3P58854 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.28□□□□□ -0.6
Tubgcp3P58854 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.28□□□□□ -0.6
Tubgcp3P58854 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubgcp3P58854 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms