Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rrp1P56183 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rrp1P56183 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Rrp1P56183 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Rrp1P56183 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rrp1P56183 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rrp1P56183 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rrp1P56183 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rrp1P56183 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rrp1P56183 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rrp1P56183 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rrp1P56183 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rrp1P56183 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rrp1P56183 Nln-205ENSMUST00000224945 2486 ntBASIC12.44□□□□□ -0.42
Rrp1P56183 Gm22920-201ENSMUST00000102175 109 ntBASIC12.44□□□□□ -0.42
Rrp1P56183 Gm14193-201ENSMUST00000105067 153 ntBASIC12.44□□□□□ -0.42
Rrp1P56183 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC12.44□□□□□ -0.42
Rrp1P56183 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.44□□□□□ -0.42
Rrp1P56183 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC12.44□□□□□ -0.42
Rrp1P56183 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.44□□□□□ -0.42
Rrp1P56183 Gm37284-201ENSMUST00000193607 539 ntBASIC12.44□□□□□ -0.42
Rrp1P56183 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.44□□□□□ -0.42
Rrp1P56183 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.44□□□□□ -0.42
Rrp1P56183 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.44□□□□□ -0.42
Rrp1P56183 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.44□□□□□ -0.42
Rrp1P56183 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rrp1P56183 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.44□□□□□ -0.42
Rrp1P56183 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rrp1P56183 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.44□□□□□ -0.42
Rrp1P56183 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Rrp1P56183 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rrp1P56183 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rrp1P56183 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rrp1P56183 AC140462.2-201ENSMUST00000225718 2433 ntBASIC12.44□□□□□ -0.42
Rrp1P56183 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rrp1P56183 Gm42815-201ENSMUST00000198787 1470 ntBASIC12.44□□□□□ -0.42
Rrp1P56183 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rrp1P56183 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rrp1P56183 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rrp1P56183 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rrp1P56183 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rrp1P56183 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rrp1P56183 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rrp1P56183 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.43□□□□□ -0.42
Rrp1P56183 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rrp1P56183 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Rrp1P56183 Spata33-207ENSMUST00000212760 4074 ntBASIC12.43□□□□□ -0.42
Rrp1P56183 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Rrp1P56183 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rrp1P56183 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rrp1P56183 AC122367.1-201ENSMUST00000221978 1709 ntBASIC12.43□□□□□ -0.42
Rrp1P56183 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rrp1P56183 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Rrp1P56183 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rrp1P56183 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rrp1P56183 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rrp1P56183 Gm23200-201ENSMUST00000104379 132 ntBASIC12.43□□□□□ -0.42
Rrp1P56183 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Rrp1P56183 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
Rrp1P56183 Gm14058-201ENSMUST00000116082 735 ntBASIC12.43□□□□□ -0.42
Rrp1P56183 Gm14398-201ENSMUST00000117287 1073 ntBASIC12.43□□□□□ -0.42
Rrp1P56183 Gm8302-201ENSMUST00000119217 852 ntBASIC12.43□□□□□ -0.42
Rrp1P56183 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Rrp1P56183 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.43□□□□□ -0.42
Rrp1P56183 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Rrp1P56183 Gm18367-201ENSMUST00000176139 600 ntBASIC12.43□□□□□ -0.42
Rrp1P56183 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.43□□□□□ -0.42
Rrp1P56183 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.43□□□□□ -0.42
Rrp1P56183 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC12.43□□□□□ -0.42
Rrp1P56183 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.43□□□□□ -0.42
Rrp1P56183 Gm5369-201ENSMUST00000217499 588 ntBASIC12.43□□□□□ -0.42
Rrp1P56183 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.43□□□□□ -0.42
Rrp1P56183 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rrp1P56183 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rrp1P56183 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Rrp1P56183 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rrp1P56183 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rrp1P56183 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Rrp1P56183 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rrp1P56183 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rrp1P56183 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Rrp1P56183 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rrp1P56183 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rrp1P56183 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rrp1P56183 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rrp1P56183 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.43□□□□□ -0.42
Rrp1P56183 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
Rrp1P56183 Gm42602-201ENSMUST00000200288 3224 ntBASIC12.43□□□□□ -0.42
Rrp1P56183 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rrp1P56183 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Rrp1P56183 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rrp1P56183 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp1P56183 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp1P56183 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rrp1P56183 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Rrp1P56183 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rrp1P56183 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp1P56183 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp1P56183 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp1P56183 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms