Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NrlP54846 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NrlP54846 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
NrlP54846 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NrlP54846 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NrlP54846 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
NrlP54846 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NrlP54846 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
NrlP54846 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NrlP54846 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NrlP54846 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NrlP54846 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NrlP54846 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.79□□□□□ -0.52
NrlP54846 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NrlP54846 Gm14005-210ENSMUST00000225087 1413 ntBASIC11.79□□□□□ -0.52
NrlP54846 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NrlP54846 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NrlP54846 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NrlP54846 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC11.79□□□□□ -0.52
NrlP54846 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.79□□□□□ -0.52
NrlP54846 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NrlP54846 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NrlP54846 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.79□□□□□ -0.52
NrlP54846 Gm5555-201ENSMUST00000120352 1111 ntBASIC11.79□□□□□ -0.52
NrlP54846 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NrlP54846 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC11.79□□□□□ -0.52
NrlP54846 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC11.79□□□□□ -0.52
NrlP54846 Gm26119-201ENSMUST00000175601 104 ntBASIC11.79□□□□□ -0.52
NrlP54846 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC11.79□□□□□ -0.52
NrlP54846 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NrlP54846 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
NrlP54846 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
NrlP54846 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.79□□□□□ -0.52
NrlP54846 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
NrlP54846 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NrlP54846 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.79□□□□□ -0.52
NrlP54846 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
NrlP54846 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
NrlP54846 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NrlP54846 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NrlP54846 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NrlP54846 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NrlP54846 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.79□□□□□ -0.52
NrlP54846 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NrlP54846 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
NrlP54846 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
NrlP54846 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.78□□□□□ -0.52
NrlP54846 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.78□□□□□ -0.52
NrlP54846 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
NrlP54846 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
NrlP54846 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.78□□□□□ -0.52
NrlP54846 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
NrlP54846 Gm23745-201ENSMUST00000104230 125 ntBASIC11.78□□□□□ -0.52
NrlP54846 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Gm5909-201ENSMUST00000119768 1281 ntBASIC11.78□□□□□ -0.52
NrlP54846 Gm11952-201ENSMUST00000121172 821 ntBASIC11.78□□□□□ -0.52
NrlP54846 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
NrlP54846 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.78□□□□□ -0.52
NrlP54846 Gm5340-201ENSMUST00000203733 880 ntBASIC11.78□□□□□ -0.52
NrlP54846 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.78□□□□□ -0.52
NrlP54846 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.78□□□□□ -0.52
NrlP54846 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.78□□□□□ -0.52
NrlP54846 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Gm9791-201ENSMUST00000060997 447 ntBASIC11.78□□□□□ -0.52
NrlP54846 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Gm8894-201ENSMUST00000074642 666 ntBASIC11.78□□□□□ -0.52
NrlP54846 Gm7589-201ENSMUST00000085631 534 ntBASIC11.78□□□□□ -0.52
NrlP54846 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
NrlP54846 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Gm37057-201ENSMUST00000192624 1916 ntBASIC11.78□□□□□ -0.52
NrlP54846 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
NrlP54846 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NrlP54846 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
NrlP54846 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms