Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC11.05□□□□□ -0.64
Atxn1P54254 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Atxn1P54254 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Atxn1P54254 Ighv1-70-201ENSMUST00000196509 351 ntBASIC11.05□□□□□ -0.64
Atxn1P54254 Gm20568-201ENSMUST00000197129 208 ntBASIC11.05□□□□□ -0.64
Atxn1P54254 Gm43866-201ENSMUST00000203894 839 ntBASIC11.05□□□□□ -0.64
Atxn1P54254 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Atxn1P54254 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.05□□□□□ -0.64
Atxn1P54254 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Atxn1P54254 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atxn1P54254 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Atxn1P54254 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Atxn1P54254 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atxn1P54254 Gm4978-201ENSMUST00000071565 801 ntBASIC11.05□□□□□ -0.64
Atxn1P54254 Gm10580-201ENSMUST00000097985 396 ntBASIC11.05□□□□□ -0.64
Atxn1P54254 Gm10581-201ENSMUST00000097986 231 ntBASIC11.05□□□□□ -0.64
Atxn1P54254 Gm10582-201ENSMUST00000097987 396 ntBASIC11.05□□□□□ -0.64
Atxn1P54254 Gm10583-201ENSMUST00000097988 396 ntBASIC11.05□□□□□ -0.64
Atxn1P54254 Gm6478-201ENSMUST00000099450 742 ntBASIC11.05□□□□□ -0.64
Atxn1P54254 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Atxn1P54254 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atxn1P54254 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atxn1P54254 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Atxn1P54254 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atxn1P54254 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Atxn1P54254 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Atxn1P54254 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atxn1P54254 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Atxn1P54254 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Atxn1P54254 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atxn1P54254 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atxn1P54254 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Atxn1P54254 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.05□□□□□ -0.64
Atxn1P54254 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atxn1P54254 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atxn1P54254 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.04□□□□□ -0.64
Atxn1P54254 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.04□□□□□ -0.64
Atxn1P54254 Gm3283-201ENSMUST00000199319 1350 ntBASIC11.04□□□□□ -0.64
Atxn1P54254 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Atxn1P54254 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.04□□□□□ -0.64
Atxn1P54254 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.04□□□□□ -0.64
Atxn1P54254 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atxn1P54254 Gm23604-201ENSMUST00000104311 132 ntBASIC11.04□□□□□ -0.64
Atxn1P54254 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atxn1P54254 Gm12389-201ENSMUST00000117696 418 ntBASIC11.04□□□□□ -0.64
Atxn1P54254 Gm16219-201ENSMUST00000120096 274 ntBASIC11.04□□□□□ -0.64
Atxn1P54254 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atxn1P54254 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Atxn1P54254 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Atxn1P54254 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Atxn1P54254 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.04□□□□□ -0.64
Atxn1P54254 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atxn1P54254 Gm7765-201ENSMUST00000182585 974 ntBASIC11.04□□□□□ -0.64
Atxn1P54254 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Atxn1P54254 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Atxn1P54254 Gm17936-201ENSMUST00000199413 988 ntBASIC11.04□□□□□ -0.64
Atxn1P54254 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Atxn1P54254 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.04□□□□□ -0.64
Atxn1P54254 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.04□□□□□ -0.64
Atxn1P54254 Gm30055-201ENSMUST00000203175 803 ntBASIC11.04□□□□□ -0.64
Atxn1P54254 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC11.04□□□□□ -0.64
Atxn1P54254 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC11.04□□□□□ -0.64
Atxn1P54254 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.04□□□□□ -0.64
Atxn1P54254 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC11.04□□□□□ -0.64
Atxn1P54254 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atxn1P54254 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Atxn1P54254 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Atxn1P54254 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Atxn1P54254 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.04□□□□□ -0.64
Atxn1P54254 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Atxn1P54254 Gm6304-201ENSMUST00000096579 447 ntBASIC11.04□□□□□ -0.64
Atxn1P54254 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Atxn1P54254 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Atxn1P54254 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atxn1P54254 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atxn1P54254 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atxn1P54254 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atxn1P54254 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atxn1P54254 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.04□□□□□ -0.64
Atxn1P54254 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atxn1P54254 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Atxn1P54254 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atxn1P54254 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atxn1P54254 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Atxn1P54254 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Atxn1P54254 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atxn1P54254 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atxn1P54254 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Atxn1P54254 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Atxn1P54254 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.03□□□□□ -0.64
Atxn1P54254 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 AC122881.1-201ENSMUST00000225757 2695 ntBASIC11.03□□□□□ -0.64
Atxn1P54254 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Atxn1P54254 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms