Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SftpbP50405 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SftpbP50405 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SftpbP50405 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
SftpbP50405 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SftpbP50405 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SftpbP50405 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SftpbP50405 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SftpbP50405 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SftpbP50405 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
SftpbP50405 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SftpbP50405 Gm14028-201ENSMUST00000117434 479 ntBASIC11.28□□□□□ -0.6
SftpbP50405 Gm12218-201ENSMUST00000117666 399 ntBASIC11.28□□□□□ -0.6
SftpbP50405 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.28□□□□□ -0.6
SftpbP50405 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.28□□□□□ -0.6
SftpbP50405 Gm9089-201ENSMUST00000122027 526 ntBASIC11.28□□□□□ -0.6
SftpbP50405 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.28□□□□□ -0.6
SftpbP50405 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.28□□□□□ -0.6
SftpbP50405 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.28□□□□□ -0.6
SftpbP50405 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SftpbP50405 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
SftpbP50405 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SftpbP50405 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SftpbP50405 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.28□□□□□ -0.6
SftpbP50405 Gm2517-201ENSMUST00000215651 348 ntBASIC11.28□□□□□ -0.6
SftpbP50405 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.28□□□□□ -0.6
SftpbP50405 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.28□□□□□ -0.6
SftpbP50405 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SftpbP50405 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SftpbP50405 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SftpbP50405 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.28□□□□□ -0.6
SftpbP50405 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SftpbP50405 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SftpbP50405 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SftpbP50405 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SftpbP50405 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SftpbP50405 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
SftpbP50405 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SftpbP50405 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SftpbP50405 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SftpbP50405 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.28□□□□□ -0.6
SftpbP50405 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SftpbP50405 Gm45041-201ENSMUST00000207366 3108 ntBASIC11.28□□□□□ -0.6
SftpbP50405 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
SftpbP50405 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SftpbP50405 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.28□□□□□ -0.6
SftpbP50405 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SftpbP50405 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SftpbP50405 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SftpbP50405 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SftpbP50405 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
SftpbP50405 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SftpbP50405 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.27□□□□□ -0.6
SftpbP50405 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
SftpbP50405 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.6
SftpbP50405 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SftpbP50405 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SftpbP50405 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
SftpbP50405 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.27□□□□□ -0.61
SftpbP50405 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SftpbP50405 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SftpbP50405 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SftpbP50405 Gm22920-201ENSMUST00000102175 109 ntBASIC11.27□□□□□ -0.61
SftpbP50405 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SftpbP50405 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SftpbP50405 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.27□□□□□ -0.61
SftpbP50405 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.27□□□□□ -0.61
SftpbP50405 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.27□□□□□ -0.61
SftpbP50405 Gm5302-201ENSMUST00000202130 796 ntBASIC11.27□□□□□ -0.61
SftpbP50405 Gm19208-201ENSMUST00000213861 912 ntBASIC11.27□□□□□ -0.61
SftpbP50405 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC11.27□□□□□ -0.61
SftpbP50405 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.27□□□□□ -0.61
SftpbP50405 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.27□□□□□ -0.61
SftpbP50405 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.27□□□□□ -0.61
SftpbP50405 Gm1821-202ENSMUST00000227415 750 ntBASIC11.27□□□□□ -0.61
SftpbP50405 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SftpbP50405 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
SftpbP50405 Olfr584-201ENSMUST00000098210 964 ntBASIC11.27□□□□□ -0.61
SftpbP50405 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SftpbP50405 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SftpbP50405 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SftpbP50405 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SftpbP50405 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SftpbP50405 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SftpbP50405 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SftpbP50405 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.27□□□□□ -0.61
SftpbP50405 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SftpbP50405 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
SftpbP50405 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SftpbP50405 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SftpbP50405 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SftpbP50405 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SftpbP50405 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SftpbP50405 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SftpbP50405 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
SftpbP50405 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
SftpbP50405 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SftpbP50405 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SftpbP50405 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SftpbP50405 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms