Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
GdnfP48540 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 Gm14435-201ENSMUST00000108995 643 ntAPPRIS P5 TSL 2 BASIC9.78□□□□□ -0.84
GdnfP48540 Gm15236-201ENSMUST00000117309 379 ntBASIC9.78□□□□□ -0.84
GdnfP48540 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC9.78□□□□□ -0.84
GdnfP48540 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
GdnfP48540 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC9.78□□□□□ -0.84
GdnfP48540 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC9.78□□□□□ -0.84
GdnfP48540 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 Mir7677-201ENSMUST00000184226 67 ntBASIC9.78□□□□□ -0.84
GdnfP48540 Gm28450-201ENSMUST00000187349 638 ntBASIC9.78□□□□□ -0.84
GdnfP48540 Gm43222-201ENSMUST00000199013 603 ntBASIC9.78□□□□□ -0.84
GdnfP48540 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC9.78□□□□□ -0.84
GdnfP48540 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC9.78□□□□□ -0.84
GdnfP48540 Gm18730-201ENSMUST00000218038 343 ntBASIC9.78□□□□□ -0.84
GdnfP48540 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
GdnfP48540 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
GdnfP48540 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
GdnfP48540 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
GdnfP48540 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 Gm28693-201ENSMUST00000189622 2638 ntBASIC9.78□□□□□ -0.84
GdnfP48540 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC9.78□□□□□ -0.84
GdnfP48540 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
GdnfP48540 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC9.78□□□□□ -0.84
GdnfP48540 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
GdnfP48540 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
GdnfP48540 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
GdnfP48540 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
GdnfP48540 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
GdnfP48540 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
GdnfP48540 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
GdnfP48540 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
GdnfP48540 Gm43143-201ENSMUST00000196083 2023 ntBASIC9.77□□□□□ -0.85
GdnfP48540 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
GdnfP48540 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
GdnfP48540 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
GdnfP48540 Gm16481-201ENSMUST00000119074 1227 ntBASIC9.77□□□□□ -0.85
GdnfP48540 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC9.77□□□□□ -0.85
GdnfP48540 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
GdnfP48540 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC9.77□□□□□ -0.85
GdnfP48540 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
GdnfP48540 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC9.77□□□□□ -0.85
GdnfP48540 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC9.77□□□□□ -0.85
GdnfP48540 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC9.77□□□□□ -0.85
GdnfP48540 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
GdnfP48540 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
GdnfP48540 Gm27552-201ENSMUST00000183351 62 ntBASIC9.77□□□□□ -0.85
GdnfP48540 Gm27844-201ENSMUST00000183613 62 ntBASIC9.77□□□□□ -0.85
GdnfP48540 Gm29199-201ENSMUST00000187766 775 ntBASIC9.77□□□□□ -0.85
GdnfP48540 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC9.77□□□□□ -0.85
GdnfP48540 Gm38117-201ENSMUST00000194653 939 ntBASIC9.77□□□□□ -0.85
GdnfP48540 Gm37709-201ENSMUST00000195074 600 ntBASIC9.77□□□□□ -0.85
GdnfP48540 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC9.77□□□□□ -0.85
GdnfP48540 AC159205.7-201ENSMUST00000225988 692 ntBASIC9.77□□□□□ -0.85
GdnfP48540 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
GdnfP48540 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
GdnfP48540 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
GdnfP48540 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC9.77□□□□□ -0.85
GdnfP48540 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
GdnfP48540 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
GdnfP48540 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
GdnfP48540 Gm44286-201ENSMUST00000204098 1487 ntBASIC9.77□□□□□ -0.85
GdnfP48540 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
GdnfP48540 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
GdnfP48540 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
GdnfP48540 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC9.77□□□□□ -0.85
GdnfP48540 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
GdnfP48540 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.77□□□□□ -0.85
GdnfP48540 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC9.77□□□□□ -0.85
GdnfP48540 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
GdnfP48540 Gm42427-201ENSMUST00000200473 5292 ntBASIC9.76□□□□□ -0.85
GdnfP48540 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
GdnfP48540 Gm7993-201ENSMUST00000200970 1384 ntBASIC9.76□□□□□ -0.85
GdnfP48540 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
GdnfP48540 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
GdnfP48540 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC9.76□□□□□ -0.85
GdnfP48540 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
GdnfP48540 Gm44663-201ENSMUST00000206898 3150 ntBASIC9.76□□□□□ -0.85
GdnfP48540 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
GdnfP48540 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
GdnfP48540 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
GdnfP48540 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
GdnfP48540 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
GdnfP48540 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
GdnfP48540 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
GdnfP48540 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
GdnfP48540 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
GdnfP48540 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
GdnfP48540 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
GdnfP48540 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms