Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC9.07□□□□□ -0.96
VhlP40338 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC9.07□□□□□ -0.96
VhlP40338 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC9.07□□□□□ -0.96
VhlP40338 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC9.07□□□□□ -0.96
VhlP40338 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC9.07□□□□□ -0.96
VhlP40338 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
VhlP40338 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
VhlP40338 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC9.06□□□□□ -0.96
VhlP40338 Gm43999-201ENSMUST00000204286 2889 ntBASIC9.06□□□□□ -0.96
VhlP40338 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC9.06□□□□□ -0.96
VhlP40338 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC9.06□□□□□ -0.96
VhlP40338 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
VhlP40338 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC9.06□□□□□ -0.96
VhlP40338 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
VhlP40338 Gm25148-201ENSMUST00000104611 123 ntBASIC9.06□□□□□ -0.96
VhlP40338 Gm13916-201ENSMUST00000117368 628 ntBASIC9.06□□□□□ -0.96
VhlP40338 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
VhlP40338 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC9.06□□□□□ -0.96
VhlP40338 Gm26083-201ENSMUST00000157904 193 ntBASIC9.06□□□□□ -0.96
VhlP40338 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
VhlP40338 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Gm18734-201ENSMUST00000172937 808 ntBASIC9.06□□□□□ -0.96
VhlP40338 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Gm4959-201ENSMUST00000197271 1044 ntBASIC9.06□□□□□ -0.96
VhlP40338 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC9.06□□□□□ -0.96
VhlP40338 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC9.06□□□□□ -0.96
VhlP40338 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC9.06□□□□□ -0.96
VhlP40338 Gm8913-201ENSMUST00000209491 641 ntBASIC9.06□□□□□ -0.96
VhlP40338 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC9.06□□□□□ -0.96
VhlP40338 Gm6082-201ENSMUST00000215204 454 ntBASIC9.06□□□□□ -0.96
VhlP40338 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC9.06□□□□□ -0.96
VhlP40338 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC9.06□□□□□ -0.96
VhlP40338 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Gm10782-202ENSMUST00000223775 1480 ntBASIC9.06□□□□□ -0.96
VhlP40338 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC9.06□□□□□ -0.96
VhlP40338 Gm43274-201ENSMUST00000202545 5000 ntBASIC9.06□□□□□ -0.96
VhlP40338 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
VhlP40338 AA474408-201ENSMUST00000098110 3339 ntBASIC9.06□□□□□ -0.96
VhlP40338 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
VhlP40338 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Gm45161-201ENSMUST00000207316 2263 ntBASIC9.06□□□□□ -0.96
VhlP40338 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC9.06□□□□□ -0.96
VhlP40338 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VhlP40338 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC9.05□□□□□ -0.96
VhlP40338 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VhlP40338 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VhlP40338 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC9.05□□□□□ -0.96
VhlP40338 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC9.05□□□□□ -0.96
VhlP40338 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VhlP40338 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VhlP40338 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VhlP40338 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
VhlP40338 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VhlP40338 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VhlP40338 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms