Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm22846-201ENSMUST00000157706 270 ntBASIC9.21□□□□□ -0.94
Col8a2P25318 Gm25830-201ENSMUST00000158923 132 ntBASIC9.21□□□□□ -0.94
Col8a2P25318 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC9.21□□□□□ -0.94
Col8a2P25318 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC9.21□□□□□ -0.94
Col8a2P25318 Mir8091-201ENSMUST00000183602 139 ntBASIC9.21□□□□□ -0.94
Col8a2P25318 Gm42867-201ENSMUST00000202995 469 ntBASIC9.21□□□□□ -0.94
Col8a2P25318 Gm7183-201ENSMUST00000213870 1005 ntBASIC9.21□□□□□ -0.94
Col8a2P25318 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC9.21□□□□□ -0.94
Col8a2P25318 Gm8255-201ENSMUST00000218693 305 ntBASIC9.21□□□□□ -0.94
Col8a2P25318 Gm7959-201ENSMUST00000221823 1078 ntBASIC9.21□□□□□ -0.94
Col8a2P25318 CT025618.1-203ENSMUST00000227008 589 ntBASIC9.21□□□□□ -0.94
Col8a2P25318 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Col8a2P25318 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col8a2P25318 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col8a2P25318 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col8a2P25318 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Col8a2P25318 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col8a2P25318 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col8a2P25318 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col8a2P25318 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Col8a2P25318 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col8a2P25318 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC9.21□□□□□ -0.94
Col8a2P25318 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC9.21□□□□□ -0.94
Col8a2P25318 Gm42498-201ENSMUST00000199981 1372 ntBASIC9.21□□□□□ -0.94
Col8a2P25318 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col8a2P25318 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col8a2P25318 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Col8a2P25318 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col8a2P25318 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Col8a2P25318 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Col8a2P25318 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col8a2P25318 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col8a2P25318 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col8a2P25318 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col8a2P25318 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col8a2P25318 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col8a2P25318 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col8a2P25318 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col8a2P25318 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Col8a2P25318 Gm13135-201ENSMUST00000117628 3121 ntBASIC9.2□□□□□ -0.94
Col8a2P25318 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col8a2P25318 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC9.2□□□□□ -0.94
Col8a2P25318 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col8a2P25318 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col8a2P25318 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col8a2P25318 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Col8a2P25318 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col8a2P25318 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col8a2P25318 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col8a2P25318 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col8a2P25318 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col8a2P25318 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Col8a2P25318 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Col8a2P25318 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Col8a2P25318 Gm14398-201ENSMUST00000117287 1073 ntBASIC9.2□□□□□ -0.94
Col8a2P25318 Gm12389-201ENSMUST00000117696 418 ntBASIC9.2□□□□□ -0.94
Col8a2P25318 Gm13351-201ENSMUST00000118087 414 ntBASIC9.2□□□□□ -0.94
Col8a2P25318 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC9.2□□□□□ -0.94
Col8a2P25318 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Col8a2P25318 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC9.2□□□□□ -0.94
Col8a2P25318 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Col8a2P25318 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col8a2P25318 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC9.2□□□□□ -0.94
Col8a2P25318 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col8a2P25318 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
Col8a2P25318 Gm22877-201ENSMUST00000175451 105 ntBASIC9.2□□□□□ -0.94
Col8a2P25318 Gm26989-201ENSMUST00000182608 749 ntBASIC9.2□□□□□ -0.94
Col8a2P25318 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC9.2□□□□□ -0.94
Col8a2P25318 Gm28833-201ENSMUST00000189671 559 ntBASIC9.2□□□□□ -0.94
Col8a2P25318 Gm31274-201ENSMUST00000197356 229 ntBASIC9.2□□□□□ -0.94
Col8a2P25318 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC9.2□□□□□ -0.94
Col8a2P25318 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC9.2□□□□□ -0.94
Col8a2P25318 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Col8a2P25318 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC9.2□□□□□ -0.94
Col8a2P25318 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC9.2□□□□□ -0.94
Col8a2P25318 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Col8a2P25318 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC9.2□□□□□ -0.94
Col8a2P25318 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col8a2P25318 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Col8a2P25318 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC9.2□□□□□ -0.94
Col8a2P25318 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col8a2P25318 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC9.2□□□□□ -0.94
Col8a2P25318 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Col8a2P25318 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Col8a2P25318 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Col8a2P25318 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col8a2P25318 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
Col8a2P25318 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC9.2□□□□□ -0.94
Col8a2P25318 Gm7278-201ENSMUST00000119836 1401 ntBASIC9.2□□□□□ -0.94
Col8a2P25318 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Col8a2P25318 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col8a2P25318 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC9.2□□□□□ -0.94
Col8a2P25318 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col8a2P25318 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col8a2P25318 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col8a2P25318 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Col8a2P25318 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Col8a2P25318 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC9.19□□□□□ -0.94
Col8a2P25318 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms