Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
UbbP0CG49 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
UbbP0CG49 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
UbbP0CG49 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC9.62□□□□□ -0.87
UbbP0CG49 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
UbbP0CG49 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
UbbP0CG49 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
UbbP0CG49 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
UbbP0CG49 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
UbbP0CG49 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
UbbP0CG49 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
UbbP0CG49 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
UbbP0CG49 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC9.62□□□□□ -0.87
UbbP0CG49 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
UbbP0CG49 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
UbbP0CG49 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
UbbP0CG49 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC9.62□□□□□ -0.87
UbbP0CG49 Gm37031-201ENSMUST00000195487 2530 ntBASIC9.61□□□□□ -0.87
UbbP0CG49 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
UbbP0CG49 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
UbbP0CG49 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
UbbP0CG49 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
UbbP0CG49 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
UbbP0CG49 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
UbbP0CG49 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
UbbP0CG49 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
UbbP0CG49 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
UbbP0CG49 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
UbbP0CG49 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
UbbP0CG49 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
UbbP0CG49 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
UbbP0CG49 Gm14130-201ENSMUST00000118417 987 ntBASIC9.61□□□□□ -0.87
UbbP0CG49 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC9.61□□□□□ -0.87
UbbP0CG49 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC9.61□□□□□ -0.87
UbbP0CG49 Gm25668-201ENSMUST00000157700 129 ntBASIC9.61□□□□□ -0.87
UbbP0CG49 Gm23085-201ENSMUST00000157849 293 ntBASIC9.61□□□□□ -0.87
UbbP0CG49 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC9.61□□□□□ -0.87
UbbP0CG49 Ighv1-48-201ENSMUST00000191795 294 ntBASIC9.61□□□□□ -0.87
UbbP0CG49 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
UbbP0CG49 Gm43058-201ENSMUST00000197645 625 ntBASIC9.61□□□□□ -0.87
UbbP0CG49 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC9.61□□□□□ -0.87
UbbP0CG49 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
UbbP0CG49 AC133602.1-201ENSMUST00000227510 509 ntBASIC9.61□□□□□ -0.87
UbbP0CG49 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
UbbP0CG49 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
UbbP0CG49 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
UbbP0CG49 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC9.61□□□□□ -0.87
UbbP0CG49 AC149588.2-201ENSMUST00000228182 1859 ntBASIC9.61□□□□□ -0.87
UbbP0CG49 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
UbbP0CG49 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
UbbP0CG49 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
UbbP0CG49 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC9.61□□□□□ -0.87
UbbP0CG49 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
UbbP0CG49 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
UbbP0CG49 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
UbbP0CG49 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
UbbP0CG49 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
UbbP0CG49 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
UbbP0CG49 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
UbbP0CG49 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
UbbP0CG49 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UbbP0CG49 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
UbbP0CG49 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
UbbP0CG49 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
UbbP0CG49 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
UbbP0CG49 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
UbbP0CG49 Gm13812-201ENSMUST00000118061 1347 ntBASIC9.6□□□□□ -0.87
UbbP0CG49 Gm13810-201ENSMUST00000118584 1347 ntBASIC9.6□□□□□ -0.87
UbbP0CG49 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
UbbP0CG49 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
UbbP0CG49 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC9.6□□□□□ -0.87
UbbP0CG49 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
UbbP0CG49 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UbbP0CG49 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UbbP0CG49 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UbbP0CG49 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
UbbP0CG49 Gm12012-201ENSMUST00000118857 1066 ntBASIC9.6□□□□□ -0.87
UbbP0CG49 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC9.6□□□□□ -0.87
UbbP0CG49 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC9.6□□□□□ -0.87
UbbP0CG49 Gm25881-201ENSMUST00000157783 103 ntBASIC9.6□□□□□ -0.87
UbbP0CG49 Gm24749-201ENSMUST00000157838 343 ntBASIC9.6□□□□□ -0.87
UbbP0CG49 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UbbP0CG49 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC9.6□□□□□ -0.87
UbbP0CG49 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
UbbP0CG49 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC9.6□□□□□ -0.87
UbbP0CG49 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC9.6□□□□□ -0.87
UbbP0CG49 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
UbbP0CG49 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC9.6□□□□□ -0.87
UbbP0CG49 Gm27441-201ENSMUST00000185000 105 ntBASIC9.6□□□□□ -0.87
UbbP0CG49 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
UbbP0CG49 Gm43667-201ENSMUST00000198616 1095 ntBASIC9.6□□□□□ -0.87
UbbP0CG49 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
UbbP0CG49 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC9.6□□□□□ -0.87
UbbP0CG49 Gm43758-201ENSMUST00000199500 367 ntBASIC9.6□□□□□ -0.87
UbbP0CG49 Gm7118-201ENSMUST00000200167 1003 ntBASIC9.6□□□□□ -0.87
UbbP0CG49 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
UbbP0CG49 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UbbP0CG49 Gm5996-201ENSMUST00000211110 718 ntBASIC9.6□□□□□ -0.87
UbbP0CG49 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
UbbP0CG49 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms