Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxa3P02831 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxa3P02831 Gm36940-201ENSMUST00000194281 2036 ntBASIC9.31□□□□□ -0.92
Hoxa3P02831 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxa3P02831 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxa3P02831 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxa3P02831 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9.31□□□□□ -0.92
Hoxa3P02831 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxa3P02831 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Hoxa3P02831 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC9.31□□□□□ -0.92
Hoxa3P02831 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC9.31□□□□□ -0.92
Hoxa3P02831 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxa3P02831 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC9.31□□□□□ -0.92
Hoxa3P02831 Gm5342-201ENSMUST00000181982 1003 ntBASIC9.31□□□□□ -0.92
Hoxa3P02831 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC9.31□□□□□ -0.92
Hoxa3P02831 Gm37284-201ENSMUST00000193607 539 ntBASIC9.31□□□□□ -0.92
Hoxa3P02831 Gm19166-201ENSMUST00000196041 1063 ntBASIC9.31□□□□□ -0.92
Hoxa3P02831 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxa3P02831 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC9.31□□□□□ -0.92
Hoxa3P02831 Gm3726-201ENSMUST00000203110 785 ntBASIC9.31□□□□□ -0.92
Hoxa3P02831 Gm45856-201ENSMUST00000212752 416 ntBASIC9.31□□□□□ -0.92
Hoxa3P02831 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC9.31□□□□□ -0.92
Hoxa3P02831 AC134248.1-201ENSMUST00000216113 1176 ntBASIC9.31□□□□□ -0.92
Hoxa3P02831 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC9.31□□□□□ -0.92
Hoxa3P02831 AC164618.2-201ENSMUST00000224770 573 ntBASIC9.31□□□□□ -0.92
Hoxa3P02831 AC129308.3-201ENSMUST00000225652 524 ntBASIC9.31□□□□□ -0.92
Hoxa3P02831 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxa3P02831 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxa3P02831 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxa3P02831 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Hoxa3P02831 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxa3P02831 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxa3P02831 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC9.31□□□□□ -0.92
Hoxa3P02831 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxa3P02831 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxa3P02831 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Hoxa3P02831 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxa3P02831 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxa3P02831 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxa3P02831 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxa3P02831 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
Hoxa3P02831 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
Hoxa3P02831 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Hoxa3P02831 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxa3P02831 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC9.31□□□□□ -0.92
Hoxa3P02831 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxa3P02831 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxa3P02831 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC9.31□□□□□ -0.92
Hoxa3P02831 Gm13615-201ENSMUST00000120242 1612 ntBASIC9.31□□□□□ -0.92
Hoxa3P02831 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.31□□□□□ -0.92
Hoxa3P02831 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Hoxa3P02831 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Hoxa3P02831 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC9.3□□□□□ -0.92
Hoxa3P02831 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
Hoxa3P02831 Selenot-ps-201ENSMUST00000119098 593 ntBASIC9.3□□□□□ -0.92
Hoxa3P02831 Gm12791-201ENSMUST00000120788 655 ntBASIC9.3□□□□□ -0.92
Hoxa3P02831 Gm12628-201ENSMUST00000122193 382 ntBASIC9.3□□□□□ -0.92
Hoxa3P02831 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC9.3□□□□□ -0.92
Hoxa3P02831 Gm3329-201ENSMUST00000159873 556 ntBASIC9.3□□□□□ -0.92
Hoxa3P02831 Olfml3-204ENSMUST00000169286 874 ntBASIC9.3□□□□□ -0.92
Hoxa3P02831 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC9.3□□□□□ -0.92
Hoxa3P02831 Gm6407-201ENSMUST00000176468 549 ntBASIC9.3□□□□□ -0.92
Hoxa3P02831 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC9.3□□□□□ -0.92
Hoxa3P02831 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC9.3□□□□□ -0.92
Hoxa3P02831 Gm29164-201ENSMUST00000185454 1024 ntBASIC9.3□□□□□ -0.92
Hoxa3P02831 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC9.3□□□□□ -0.92
Hoxa3P02831 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Gm37638-201ENSMUST00000194337 1123 ntBASIC9.3□□□□□ -0.92
Hoxa3P02831 Gm9884-201ENSMUST00000194343 1222 ntBASIC9.3□□□□□ -0.92
Hoxa3P02831 Gm30946-201ENSMUST00000198288 724 ntBASIC9.3□□□□□ -0.92
Hoxa3P02831 Gm45120-201ENSMUST00000208880 408 ntBASIC9.3□□□□□ -0.92
Hoxa3P02831 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC9.3□□□□□ -0.92
Hoxa3P02831 Gm5599-201ENSMUST00000209602 788 ntBASIC9.3□□□□□ -0.92
Hoxa3P02831 Mt1-202ENSMUST00000211807 1085 ntBASIC9.3□□□□□ -0.92
Hoxa3P02831 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC9.3□□□□□ -0.92
Hoxa3P02831 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC9.3□□□□□ -0.92
Hoxa3P02831 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Hoxa3P02831 Gm18968-201ENSMUST00000221319 862 ntBASIC9.3□□□□□ -0.92
Hoxa3P02831 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC9.3□□□□□ -0.92
Hoxa3P02831 CT009527.1-201ENSMUST00000224205 339 ntBASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms