Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Gm14071-201ENSMUST00000117817 509 ntBASIC13.39□□□□□ -0.27
NpcdF8VQB8 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC13.39□□□□□ -0.27
NpcdF8VQB8 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Gm43117-201ENSMUST00000198531 379 ntBASIC13.39□□□□□ -0.27
NpcdF8VQB8 Gm43106-201ENSMUST00000199485 637 ntBASIC13.39□□□□□ -0.27
NpcdF8VQB8 Gm43966-201ENSMUST00000203301 612 ntBASIC13.39□□□□□ -0.27
NpcdF8VQB8 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Gm5278-201ENSMUST00000055957 552 ntBASIC13.39□□□□□ -0.27
NpcdF8VQB8 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Gm7701-201ENSMUST00000163185 1479 ntBASIC13.39□□□□□ -0.27
NpcdF8VQB8 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NpcdF8VQB8 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Gm6211-201ENSMUST00000147973 4275 ntBASIC13.38□□□□□ -0.27
NpcdF8VQB8 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NpcdF8VQB8 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Gm19246-201ENSMUST00000173599 255 ntBASIC13.38□□□□□ -0.27
NpcdF8VQB8 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC13.38□□□□□ -0.27
NpcdF8VQB8 Gm4753-201ENSMUST00000188327 1255 ntBASIC13.38□□□□□ -0.27
NpcdF8VQB8 Gm5254-201ENSMUST00000188353 977 ntBASIC13.38□□□□□ -0.27
NpcdF8VQB8 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC13.38□□□□□ -0.27
NpcdF8VQB8 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
NpcdF8VQB8 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
NpcdF8VQB8 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NpcdF8VQB8 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NpcdF8VQB8 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms