Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Gm5739-201ENSMUST00000208601 1703 ntBASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Mir675-201ENSMUST00000102320 84 ntBASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Gm12481-201ENSMUST00000102482 297 ntBASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Gm11700-201ENSMUST00000119409 403 ntBASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Gm11546-201ENSMUST00000120297 354 ntBASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Dcdc5-203ENSMUST00000126340 396 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Gm15208-201ENSMUST00000134448 493 ntTSL 3 BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Gm15637-201ENSMUST00000135544 817 ntTSL 3 BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Gm19705-204ENSMUST00000181524 413 ntTSL 2 BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Gm42803-201ENSMUST00000201051 451 ntBASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Gm18466-201ENSMUST00000209147 499 ntBASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Gm24146-201ENSMUST00000082760 321 ntBASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Fsip1-202ENSMUST00000028821 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Fam216b-202ENSMUST00000118785 1447 ntTSL 5 BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Gm8806-201ENSMUST00000120076 1407 ntBASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Gm5174-201ENSMUST00000171131 1423 ntBASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Cdadc1-202ENSMUST00000056997 2202 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Gm44975-201ENSMUST00000207435 1390 ntBASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc188F6WEU2 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Snord17-201ENSMUST00000104526 238 ntBASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Gm12397-201ENSMUST00000117674 615 ntBASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Tnni1-208ENSMUST00000154463 749 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Trav9n-1-201ENSMUST00000185224 339 ntBASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Ift172-206ENSMUST00000201809 405 ntTSL 5 BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 AC112259.1-201ENSMUST00000222891 853 ntTSL 2 BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Tssk4-204ENSMUST00000226591 1243 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 AC141884.2-201ENSMUST00000228811 775 ntBASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Cenph-201ENSMUST00000075550 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Ccdc188F6WEU2 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Ccdc188F6WEU2 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ccdc188F6WEU2 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Ccdc188F6WEU2 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ccdc188F6WEU2 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Ccdc188F6WEU2 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Ccdc188F6WEU2 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Ccdc188F6WEU2 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc188F6WEU2 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc188F6WEU2 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc188F6WEU2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc188F6WEU2 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc188F6WEU2 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Ccdc188F6WEU2 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms