Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Gm17799-201ENSMUST00000183270 667 ntBASIC11.17□□□□□ -0.62
Col4a6B1AVK5 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Gm19058-201ENSMUST00000192135 598 ntBASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Gm18466-201ENSMUST00000209147 499 ntBASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 AC130217.1-201ENSMUST00000224146 909 ntBASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Gm45170-201ENSMUST00000206746 1671 ntBASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col4a6B1AVK5 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Efna1-201ENSMUST00000029566 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Ppih-205ENSMUST00000106321 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Gm12254-201ENSMUST00000134617 471 ntBASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Gm8464-202ENSMUST00000146697 1142 ntBASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Gm4750-201ENSMUST00000151942 1142 ntBASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Gm4866-201ENSMUST00000197408 589 ntBASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Gm9790-201ENSMUST00000054148 288 ntBASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Mir194-2-201ENSMUST00000083648 86 ntBASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Gm32914-201ENSMUST00000203815 2228 ntBASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col4a6B1AVK5 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Dcstamp-201ENSMUST00000022913 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Serpina1e-202ENSMUST00000122229 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Gm14370-201ENSMUST00000122460 868 ntBASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Gm15273-201ENSMUST00000142302 868 ntBASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Gm7023-201ENSMUST00000147295 868 ntBASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Gm14357-201ENSMUST00000178352 868 ntBASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Gm14361-201ENSMUST00000178547 868 ntBASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Gm14348-201ENSMUST00000179183 868 ntBASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Gm26532-201ENSMUST00000180630 690 ntBASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Gm7672-201ENSMUST00000180915 872 ntBASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Gm17797-201ENSMUST00000182175 997 ntBASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Gm36980-201ENSMUST00000195643 622 ntBASIC11.15□□□□□ -0.62
Col4a6B1AVK5 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms