Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Gm24074-201ENSMUST00000158178 260 ntBASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Gm43163-201ENSMUST00000196571 442 ntBASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.5□□□□□ -0.57
Cpne8Q9DC53 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.5□□□□□ -0.57
Cpne8Q9DC53 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cpne8Q9DC53 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cpne8Q9DC53 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cpne8Q9DC53 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cpne8Q9DC53 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cpne8Q9DC53 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Cpne8Q9DC53 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cpne8Q9DC53 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cpne8Q9DC53 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC11.49□□□□□ -0.57
Cpne8Q9DC53 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cpne8Q9DC53 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.49□□□□□ -0.57
Cpne8Q9DC53 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.49□□□□□ -0.57
Cpne8Q9DC53 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cpne8Q9DC53 Snord55-201ENSMUST00000174939 79 ntBASIC11.49□□□□□ -0.57
Cpne8Q9DC53 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.49□□□□□ -0.57
Cpne8Q9DC53 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.49□□□□□ -0.57
Cpne8Q9DC53 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cpne8Q9DC53 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.49□□□□□ -0.57
Cpne8Q9DC53 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cpne8Q9DC53 Gm45398-201ENSMUST00000210561 165 ntBASIC11.49□□□□□ -0.57
Cpne8Q9DC53 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cpne8Q9DC53 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Cpne8Q9DC53 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cpne8Q9DC53 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cpne8Q9DC53 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Cpne8Q9DC53 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cpne8Q9DC53 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cpne8Q9DC53 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cpne8Q9DC53 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cpne8Q9DC53 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cpne8Q9DC53 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cpne8Q9DC53 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpne8Q9DC53 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpne8Q9DC53 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpne8Q9DC53 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpne8Q9DC53 Gm38357-201ENSMUST00000195382 2464 ntBASIC11.48□□□□□ -0.57
Cpne8Q9DC53 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpne8Q9DC53 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpne8Q9DC53 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.48□□□□□ -0.57
Cpne8Q9DC53 Gm13611-201ENSMUST00000118269 318 ntBASIC11.48□□□□□ -0.57
Cpne8Q9DC53 Gm12986-201ENSMUST00000119037 967 ntBASIC11.48□□□□□ -0.57
Cpne8Q9DC53 Gm8302-201ENSMUST00000119217 852 ntBASIC11.48□□□□□ -0.57
Cpne8Q9DC53 Gm11331-201ENSMUST00000119764 288 ntBASIC11.48□□□□□ -0.57
Cpne8Q9DC53 Gm13284-201ENSMUST00000121020 547 ntBASIC11.48□□□□□ -0.57
Cpne8Q9DC53 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpne8Q9DC53 Gm8737-201ENSMUST00000122208 642 ntBASIC11.48□□□□□ -0.57
Cpne8Q9DC53 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11.48□□□□□ -0.57
Cpne8Q9DC53 Gm25343-201ENSMUST00000157460 107 ntBASIC11.48□□□□□ -0.57
Cpne8Q9DC53 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cpne8Q9DC53 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.48□□□□□ -0.57
Cpne8Q9DC53 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpne8Q9DC53 Gm8197-202ENSMUST00000193422 934 ntBASIC11.48□□□□□ -0.57
Cpne8Q9DC53 Gm37299-201ENSMUST00000193951 826 ntBASIC11.48□□□□□ -0.57
Cpne8Q9DC53 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cpne8Q9DC53 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
Cpne8Q9DC53 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.48□□□□□ -0.57
Cpne8Q9DC53 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpne8Q9DC53 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cpne8Q9DC53 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms