Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 AC125108.1-201ENSMUST00000218986 2330 ntBASIC9.11□□□□□ -0.95
Prpf8Q99PV0 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Gm11475-201ENSMUST00000118482 476 ntBASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Gm24943-201ENSMUST00000158329 433 ntBASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC9.11□□□□□ -0.95
Prpf8Q99PV0 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Gm43854-201ENSMUST00000200418 394 ntBASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Gm42599-201ENSMUST00000201308 469 ntBASIC9.11□□□□□ -0.95
Prpf8Q99PV0 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC9.11□□□□□ -0.95
Prpf8Q99PV0 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Gm45837-201ENSMUST00000084894 4139 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Gm5740-201ENSMUST00000211003 1857 ntBASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Prpf8Q99PV0 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Gm24279-201ENSMUST00000104236 131 ntBASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Gm8255-201ENSMUST00000218693 305 ntBASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Gm10305-201ENSMUST00000195331 2475 ntBASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Mir744-201ENSMUST00000103261 100 ntBASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Gm12906-201ENSMUST00000154610 441 ntBASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Mir432-201ENSMUST00000157230 75 ntBASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Gm7069-201ENSMUST00000182418 1008 ntBASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Gm8756-201ENSMUST00000183250 929 ntBASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Gm45085-201ENSMUST00000209100 441 ntBASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Prpf8Q99PV0 AC129975.1-201ENSMUST00000224816 592 ntBASIC9.1□□□□□ -0.95
Prpf8Q99PV0 AC102847.1-202ENSMUST00000226313 1245 ntBASIC9.1□□□□□ -0.95
Prpf8Q99PV0 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms