Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Rps3a2-201ENSMUST00000074245 792 ntBASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Rps3a3-201ENSMUST00000074680 795 ntBASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Gm5403-201ENSMUST00000117105 2795 ntBASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Gm15815-201ENSMUST00000120569 255 ntBASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Gm11952-201ENSMUST00000121172 821 ntBASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Snord55-201ENSMUST00000174939 79 ntBASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Gm7572-201ENSMUST00000182616 766 ntBASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Zcwpw2-203ENSMUST00000187803 372 ntBASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Gm37851-201ENSMUST00000193871 889 ntBASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Gm6518-201ENSMUST00000208450 342 ntBASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 AC154757.2-201ENSMUST00000228885 743 ntBASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx6-1Q99MA9 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx6-1Q99MA9 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms