Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Scrt1Q99M85 Gm37368-201ENSMUST00000193173 3212 ntBASIC9.77□□□□□ -0.85
Scrt1Q99M85 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC9.76□□□□□ -0.85
Scrt1Q99M85 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 AC125374.1-201ENSMUST00000213573 1400 ntBASIC9.76□□□□□ -0.85
Scrt1Q99M85 Gm1840-201ENSMUST00000051687 1432 ntBASIC9.76□□□□□ -0.85
Scrt1Q99M85 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Mir453-201ENSMUST00000104732 82 ntBASIC9.76□□□□□ -0.85
Scrt1Q99M85 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Mir1905-201ENSMUST00000122779 82 ntBASIC9.76□□□□□ -0.85
Scrt1Q99M85 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Gm24328-201ENSMUST00000175104 67 ntBASIC9.76□□□□□ -0.85
Scrt1Q99M85 Gm11942-201ENSMUST00000180255 345 ntBASIC9.76□□□□□ -0.85
Scrt1Q99M85 Gm26976-201ENSMUST00000182929 908 ntBASIC9.76□□□□□ -0.85
Scrt1Q99M85 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Gm45481-201ENSMUST00000209717 877 ntBASIC9.76□□□□□ -0.85
Scrt1Q99M85 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 AC162932.1-201ENSMUST00000219209 872 ntBASIC9.76□□□□□ -0.85
Scrt1Q99M85 Gm7525-201ENSMUST00000219425 454 ntBASIC9.76□□□□□ -0.85
Scrt1Q99M85 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Gm8420-201ENSMUST00000097103 598 ntBASIC9.76□□□□□ -0.85
Scrt1Q99M85 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Scrt1Q99M85 Gm43937-201ENSMUST00000204640 3122 ntBASIC9.76□□□□□ -0.85
Scrt1Q99M85 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Scrt1Q99M85 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Scrt1Q99M85 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Scrt1Q99M85 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Scrt1Q99M85 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Scrt1Q99M85 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC9.75□□□□□ -0.85
Scrt1Q99M85 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Scrt1Q99M85 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC9.75□□□□□ -0.85
Scrt1Q99M85 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC9.75□□□□□ -0.85
Scrt1Q99M85 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC9.75□□□□□ -0.85
Scrt1Q99M85 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Scrt1Q99M85 Gm38194-201ENSMUST00000194529 2211 ntBASIC9.75□□□□□ -0.85
Scrt1Q99M85 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
Scrt1Q99M85 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC9.75□□□□□ -0.85
Scrt1Q99M85 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Scrt1Q99M85 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Scrt1Q99M85 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Scrt1Q99M85 AC108858.2-201ENSMUST00000228186 1425 ntBASIC9.75□□□□□ -0.85
Scrt1Q99M85 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Scrt1Q99M85 Gm5124-202ENSMUST00000132683 2083 ntBASIC9.75□□□□□ -0.85
Scrt1Q99M85 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Scrt1Q99M85 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Scrt1Q99M85 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Scrt1Q99M85 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Scrt1Q99M85 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Scrt1Q99M85 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Scrt1Q99M85 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Scrt1Q99M85 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Scrt1Q99M85 AC127597.1-201ENSMUST00000225697 5711 ntBASIC9.75□□□□□ -0.85
Scrt1Q99M85 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC9.75□□□□□ -0.85
Scrt1Q99M85 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms