Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdhga4Q91XY4 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga4Q91XY4 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga4Q91XY4 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdhga4Q91XY4 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdhga4Q91XY4 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga4Q91XY4 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga4Q91XY4 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.98□□□□□ -0.65
Pcdhga4Q91XY4 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga4Q91XY4 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdhga4Q91XY4 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdhga4Q91XY4 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga4Q91XY4 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.98□□□□□ -0.65
Pcdhga4Q91XY4 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Pcdhga4Q91XY4 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdhga4Q91XY4 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga4Q91XY4 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdhga4Q91XY4 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Gm25076-201ENSMUST00000104098 132 ntBASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Gm1848-201ENSMUST00000120711 789 ntBASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Gm3329-201ENSMUST00000159873 556 ntBASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Gm42518-201ENSMUST00000196277 938 ntBASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Gm45219-201ENSMUST00000205602 465 ntBASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Gm45856-201ENSMUST00000212752 416 ntBASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Gm19046-201ENSMUST00000221263 1298 ntBASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Gm13384-201ENSMUST00000117166 1344 ntBASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdhga4Q91XY4 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Gm37447-201ENSMUST00000195625 2928 ntBASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Gm15549-201ENSMUST00000121595 622 ntBASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Gm22846-201ENSMUST00000157706 270 ntBASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.96□□□□□ -0.65
Pcdhga4Q91XY4 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms