Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Gm29199-201ENSMUST00000187766 775 ntBASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc38Q8CDN8 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc38Q8CDN8 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc38Q8CDN8 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc38Q8CDN8 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc38Q8CDN8 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc38Q8CDN8 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc38Q8CDN8 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ccdc38Q8CDN8 Gm14592-201ENSMUST00000117201 560 ntBASIC12.36□□□□□ -0.43
Ccdc38Q8CDN8 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.36□□□□□ -0.43
Ccdc38Q8CDN8 Gm11573-201ENSMUST00000119956 394 ntBASIC12.36□□□□□ -0.43
Ccdc38Q8CDN8 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.36□□□□□ -0.43
Ccdc38Q8CDN8 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc38Q8CDN8 Mir7686-201ENSMUST00000200604 57 ntBASIC12.36□□□□□ -0.43
Ccdc38Q8CDN8 Gm5363-201ENSMUST00000211927 938 ntBASIC12.36□□□□□ -0.43
Ccdc38Q8CDN8 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc38Q8CDN8 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.36□□□□□ -0.43
Ccdc38Q8CDN8 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc38Q8CDN8 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ccdc38Q8CDN8 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc38Q8CDN8 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ccdc38Q8CDN8 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ccdc38Q8CDN8 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc38Q8CDN8 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc38Q8CDN8 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ccdc38Q8CDN8 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc38Q8CDN8 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ccdc38Q8CDN8 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ccdc38Q8CDN8 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc38Q8CDN8 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccdc38Q8CDN8 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Gm21115-201ENSMUST00000187565 2578 ntBASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Gm23699-201ENSMUST00000158835 135 ntBASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Gm4654-201ENSMUST00000183305 982 ntBASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Gm19353-201ENSMUST00000184561 445 ntBASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Gm43667-201ENSMUST00000198616 1095 ntBASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Gm19208-201ENSMUST00000213861 912 ntBASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Gm5451-201ENSMUST00000080545 579 ntBASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc38Q8CDN8 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms