Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Gm14219-201ENSMUST00000120414 288 ntBASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Gm37852-201ENSMUST00000193027 350 ntBASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Gm9487-201ENSMUST00000216600 472 ntBASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Alx1Q8C8B0 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Gm38312-201ENSMUST00000195426 1746 ntBASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Gm14234-201ENSMUST00000119539 845 ntBASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Gm8723-201ENSMUST00000166076 820 ntBASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Gm8701-201ENSMUST00000169259 874 ntBASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Gm43912-201ENSMUST00000204352 538 ntBASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Gm18035-201ENSMUST00000211962 589 ntBASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Gm8170-201ENSMUST00000218581 945 ntBASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Gm28624-201ENSMUST00000186430 2131 ntBASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Alx1Q8C8B0 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Alx1Q8C8B0 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Alx1Q8C8B0 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Alx1Q8C8B0 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Alx1Q8C8B0 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Alx1Q8C8B0 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Alx1Q8C8B0 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Alx1Q8C8B0 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Alx1Q8C8B0 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Alx1Q8C8B0 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Alx1Q8C8B0 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Alx1Q8C8B0 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Alx1Q8C8B0 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Alx1Q8C8B0 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Alx1Q8C8B0 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Alx1Q8C8B0 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Alx1Q8C8B0 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms