Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim35Q8C006 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim35Q8C006 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim35Q8C006 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim35Q8C006 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim35Q8C006 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC12.83□□□□□ -0.36
Trim35Q8C006 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim35Q8C006 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim35Q8C006 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trim35Q8C006 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Trim35Q8C006 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC12.83□□□□□ -0.36
Trim35Q8C006 Gm6447-201ENSMUST00000118905 835 ntBASIC12.83□□□□□ -0.36
Trim35Q8C006 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC12.83□□□□□ -0.36
Trim35Q8C006 Gm9078-201ENSMUST00000119126 617 ntBASIC12.83□□□□□ -0.36
Trim35Q8C006 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC12.83□□□□□ -0.36
Trim35Q8C006 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.83□□□□□ -0.36
Trim35Q8C006 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim35Q8C006 Gm8257-203ENSMUST00000179215 489 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim35Q8C006 Gm37383-201ENSMUST00000191750 745 ntBASIC12.83□□□□□ -0.36
Trim35Q8C006 Gm38041-201ENSMUST00000194445 661 ntBASIC12.83□□□□□ -0.36
Trim35Q8C006 Gm44069-201ENSMUST00000204898 506 ntBASIC12.83□□□□□ -0.36
Trim35Q8C006 Gm35501-202ENSMUST00000215101 459 ntTSL 3 BASIC12.83□□□□□ -0.36
Trim35Q8C006 AC157017.1-201ENSMUST00000220148 364 ntBASIC12.83□□□□□ -0.36
Trim35Q8C006 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim35Q8C006 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Trim35Q8C006 AL844586.1-201ENSMUST00000224297 1042 ntBASIC12.83□□□□□ -0.36
Trim35Q8C006 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.83□□□□□ -0.36
Trim35Q8C006 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim35Q8C006 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trim35Q8C006 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim35Q8C006 Gm15500-201ENSMUST00000071523 894 ntBASIC12.83□□□□□ -0.36
Trim35Q8C006 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim35Q8C006 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trim35Q8C006 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim35Q8C006 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim35Q8C006 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim35Q8C006 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim35Q8C006 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim35Q8C006 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Trim35Q8C006 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim35Q8C006 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim35Q8C006 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim35Q8C006 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Trim35Q8C006 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim35Q8C006 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim35Q8C006 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim35Q8C006 AC162301.1-201ENSMUST00000228785 1542 ntBASIC12.83□□□□□ -0.36
Trim35Q8C006 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim35Q8C006 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trim35Q8C006 Gm20539-201ENSMUST00000174811 1384 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim35Q8C006 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Trim35Q8C006 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim35Q8C006 Gm12393-201ENSMUST00000117084 848 ntBASIC12.82□□□□□ -0.36
Trim35Q8C006 Gm13702-201ENSMUST00000118542 825 ntBASIC12.82□□□□□ -0.36
Trim35Q8C006 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Gm12312-201ENSMUST00000120351 644 ntBASIC12.82□□□□□ -0.36
Trim35Q8C006 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.82□□□□□ -0.36
Trim35Q8C006 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC12.82□□□□□ -0.36
Trim35Q8C006 Gm24065-201ENSMUST00000157487 264 ntBASIC12.82□□□□□ -0.36
Trim35Q8C006 Gm23081-201ENSMUST00000157845 297 ntBASIC12.82□□□□□ -0.36
Trim35Q8C006 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC12.82□□□□□ -0.36
Trim35Q8C006 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trim35Q8C006 Atpaf1-202ENSMUST00000175725 996 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim35Q8C006 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Trim35Q8C006 4930512B01Rik-202ENSMUST00000188608 983 ntTSL 3 BASIC12.82□□□□□ -0.36
Trim35Q8C006 B130024G19Rik-204ENSMUST00000191084 634 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim35Q8C006 Shisa5-204ENSMUST00000196954 843 ntTSL 3 BASIC12.82□□□□□ -0.36
Trim35Q8C006 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.82□□□□□ -0.36
Trim35Q8C006 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC12.82□□□□□ -0.36
Trim35Q8C006 Gm43782-201ENSMUST00000202790 229 ntTSL 3 BASIC12.82□□□□□ -0.36
Trim35Q8C006 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim35Q8C006 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Trim35Q8C006 AC154633.1-201ENSMUST00000223276 449 ntBASIC12.82□□□□□ -0.36
Trim35Q8C006 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.82□□□□□ -0.36
Trim35Q8C006 CT571256.1-201ENSMUST00000226045 585 ntBASIC12.82□□□□□ -0.36
Trim35Q8C006 AC154239.2-201ENSMUST00000227859 233 ntBASIC12.82□□□□□ -0.36
Trim35Q8C006 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Gm9899-201ENSMUST00000065519 555 ntBASIC12.82□□□□□ -0.36
Trim35Q8C006 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.82□□□□□ -0.36
Trim35Q8C006 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trim35Q8C006 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trim35Q8C006 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim35Q8C006 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms