Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Snord55-201ENSMUST00000174939 79 ntBASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Gm3508-201ENSMUST00000186012 792 ntBASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Gm9463-201ENSMUST00000206707 601 ntBASIC11.85□□□□□ -0.51
Trim65Q8BFW4 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim65Q8BFW4 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Hyal2-206ENSMUST00000195681 2968 ntBASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Gm37264-201ENSMUST00000194916 2192 ntBASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Gm12986-201ENSMUST00000119037 967 ntBASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Gm13284-201ENSMUST00000121020 547 ntBASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Gm45770-201ENSMUST00000212105 616 ntBASIC11.84□□□□□ -0.51
Trim65Q8BFW4 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim65Q8BFW4 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.83□□□□□ -0.51
Trim65Q8BFW4 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim65Q8BFW4 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.83□□□□□ -0.52
Trim65Q8BFW4 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim65Q8BFW4 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trim65Q8BFW4 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim65Q8BFW4 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim65Q8BFW4 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim65Q8BFW4 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim65Q8BFW4 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms