Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx55Q6ZPL9 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 AC153524.2-202ENSMUST00000220401 1794 ntBASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Gm6755-201ENSMUST00000100598 864 ntBASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Gm6740-201ENSMUST00000100617 864 ntBASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Gm12009-201ENSMUST00000121361 1100 ntBASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Gm43667-201ENSMUST00000198616 1095 ntBASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Gm8162-201ENSMUST00000213951 665 ntBASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 AC160929.1-201ENSMUST00000221247 415 ntBASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Gm5766-201ENSMUST00000160520 1977 ntBASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.61□□□□□ -0.39
Ddx55Q6ZPL9 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Gm37058-201ENSMUST00000193393 1644 ntBASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Gm23132-201ENSMUST00000104254 132 ntBASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Gm13688-201ENSMUST00000121557 608 ntBASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Gm14006-201ENSMUST00000122132 981 ntBASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Gm43097-201ENSMUST00000196867 151 ntBASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Gm5472-201ENSMUST00000178604 1678 ntBASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx55Q6ZPL9 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Gm26174-201ENSMUST00000158415 219 ntBASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Gm27833-201ENSMUST00000184285 124 ntBASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Gm29543-201ENSMUST00000188138 967 ntBASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Gm37858-201ENSMUST00000192759 1231 ntBASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Gm29808-201ENSMUST00000194419 468 ntBASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Saa-ps-201ENSMUST00000211148 320 ntBASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Gm45893-201ENSMUST00000211899 247 ntBASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 AC155300.1-201ENSMUST00000219134 480 ntBASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 Gm18042-201ENSMUST00000219887 790 ntBASIC12.59□□□□□ -0.39
Ddx55Q6ZPL9 AC133517.1-201ENSMUST00000225825 594 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms